Structural Classification of Proteins
home mail help root up expand collapse

Family: PYP-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Profilin-like [55769]
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. Superfamily: PYP-like sensor domain (PAS domain) [55785]
    alpha-beta(2)-alpha(2)-beta(3)
    link to SUPERFAMILY database - Superfamily
  5. Family: PYP-like [55786]

Protein Domains:

  1. Photoactive yellow protein, PYP [55787]
    1. Ectothiorhodospira halophila [TaxId: 1053] [55788] (43)
      SQ P16113
      1. 1nwz picpic
        ultra-high resolution structure
        complexed with hc4
        1. chain a [86370] picpiclink
      2. 3pyp picpic
        cryotrapped early light cycle intermediate
        complexed with hc4
        1. chain a [40897] picpiclink
      3. 1ot6 picpic
        complexed with hc4; mutant
        1. chain a [93504] picpiclink
      4. 1ot9 picpic
        complexed with hc4
        1. chain a [93510] picpiclink
      5. 2qj7 picpic
        automatically matched to d1nwza_
        complexed with hc4
        1. region a:3-125 [150822] picpiclink
      6. 1otb picpic
        complexed with hc4
        1. chain a [93512] picpiclink
      7. 1f9i picpic
        complexed with hc4; mutant
        1. chain a [40898] picpiclink
      8. 1ota picpic
        complexed with hc4; mutant
        1. chain a [93511] picpiclink
      9. 1f98 picpic
        complexed with hc4; mutant
        1. chain a [40899] picpiclink
      10. 1uwn picpic
        complexed with hc4, so4
        1. chain x [100127] picpiclink
      11. 1uwp picpic
        automatically matched to d1nwza_
        complexed with hc4, so4
        1. region x:1-125 [119764] picpiclink
      12. 1kou picpic
        complexed with but, dhc
        1. chain a [72832] picpiclink
      13. 1ugu picpic
        complexed with hc4; mutant
        1. chain a [107839] picpiclink
      14. 2qj5 picpic
        automatically matched to d1nwza_
        complexed with hc4
        1. region a:3-125 [150821] picpiclink
      15. 1otd picpic
        complexed with hc4
        1. chain a [93513] picpiclink
        2. chain b [93514] picpiclink
      16. 1d7e picpic
        the p65 crystal form
        complexed with hc4
        1. chain a [40900] picpiclink
      17. 2d01 picpic
        automatically matched to d1nwza_
        complexed with hc4
        1. region a:2-125 [131059] picpiclink
      18. 1oti picpic
        complexed with hc4; mutant
        1. chain a [93516] picpiclink
      19. 1s1z picpic
        complexed with hc4; mutant
        1. chain a [105221] picpiclink
      20. 1s1y picpic
        complexed with hc4; mutant
        1. chain a [105220] picpiclink
      21. 1ote picpic
        complexed with hc4; mutant
        1. chain a [93515] picpiclink
      22. 2phy picpic
        complexed with hc4
        1. chain a [40901] picpiclink
      23. 1ts0 picpic
        automatically matched to d1nwza_
        complexed with hc4
        1. region a:1-125 [119330] picpiclink
      24. 1t1c picpic
        automatically matched to d1ot6a_
        complexed with hc4; mutant
        1. region a:1-125 [119106] picpiclink
      25. 1ts6 picpic
        automatically matched to d1nwza_
        complexed with hc4
        1. region a:1-125 [119331] picpiclink
      26. 1t19 picpic
        automatically matched to d1ot6a_
        complexed with hc4; mutant
        1. region a:1-125 [119103] picpiclink
      27. 1gsv picpic
        complexed with hc4; mutant
        1. chain a [65537] picpiclink
      28. 1t18 picpic
        automatically matched to d1ot6a_
        complexed with hc4; mutant
        1. region a:1-125 [119102] picpiclink
      29. 1gsx picpic
        complexed with hc4; mutant
        1. chain a [65539] picpiclink
      30. 1gsw picpic
        complexed with hc4; mutant
        1. chain a [65538] picpiclink
      31. 2pyp picpic
        photostationary state: 50% ground state, 50% bleached
        complexed with hc4
        1. chain a [40902] picpiclink
      32. 1t1a picpic
        automatically matched to d1ot6a_
        complexed with hc4; mutant
        1. region a:1-125 [119104] picpiclink
      33. 1t1b picpic
        automatically matched to d1ot6a_
        complexed with hc4; mutant
        1. region a:1-125 [119105] picpiclink
      34. 1s4r picpic
        complexed with hc4
        1. chain a [98508] picpiclink
      35. 2pyr picpic
        complexed with hc4
        1. chain a [40903] picpiclink
      36. 1s4s picpic
        complexed with hc4
        1. chain a [98509] picpiclink
      37. 1ts8 picpic
        automatically matched to d1nwza_
        complexed with hc4
        1. region a:1-125 [119333] picpiclink
      38. 1ts7 picpic
        automatically matched to d1nwza_
        complexed with hc4
        1. region a:1-125 [119332] picpiclink
      39. 2qws picpic
        automatically matched to d1nwza_
        complexed with hc4
        1. region a:3-125 [151438] picpiclink
      40. 1xfn picpic
        automatically matched to d1odva_
        complexed with hc4
        1. region a:26-125 [121934] picpiclink
      41. 1xfq picpic
        automatically matched to d1odva_
        complexed with hc4
        1. region a:26-125 [121935] picpiclink
      42. 3phy picpic
        dark state (unbleached)
        complexed with hc4
        1. chain a [40904] picpiclink
      43. 1odv picpic
        1-25 deletion mutant
        1. chain a [86887] picpiclink
        2. chain b [86888] picpiclink
  2. PYP domain of sensor histidine kinase Ppr [82762]
    1. Rhodospirillum centenum [TaxId: 34018] [82763] (1)
      1. 1mzu picpic
        complexed with hc4
        1. chain a [79714] picpiclink
        2. chain b [79715] picpiclink
        3. chain c [79716] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk