Structural Classification of Proteins
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Superfamily: SNARE-like

beta(2)-alpha-beta(3)-alpha(2)
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Profilin-like [55769]
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. Superfamily: SNARE-like [64356]
    beta(2)-alpha-beta(3)-alpha(2)
    link to SUPERFAMILY database - Superfamily

Families:

  1. Synatpobrevin N-terminal domain [64357] (2)
    1. Sec22b [64358]
      1. Mouse (Mus musculus) [TaxId: 10090] [64359] (1)
        1. 1ifq picpic
          complexed with gol
          1. chain a [62350] picpiclink
          2. chain b [62351] picpiclink
    2. Synaptobrevin homolog 1 ykt6 [64360]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64361] (2)
        1. 1iou picpic
          1. chain a [83699] picpiclink
        2. 1h8m picpic
          1. chain a [60782] picpiclink
  2. Sedlin (SEDL) [82767] (1)
    1. Sedlin (SEDL) [82768]
      1. Mouse (Mus musculus) [TaxId: 10090] [82769] (3)
        1. 2j3w picpicxrefxref
          automatically matched to d1h3qa_
          complexed with p1l
          1. region a:1-140 [137981] picpiclink
        2. 2j3w picpicxrefxref
          automatically matched to d1h3qa_
          complexed with p1l
          1. region c:1-140 [137982] picpiclink
        3. 1h3q picpic
          1. chain a [76652] picpiclink
  3. Clathrin coat assembly domain [75521] (2)
    1. Mu2 adaptin (clathrin coat assembly protein AP50) [75522]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [75523] (1)
        1. 1gw5 picpicxrefxrefxref
          complexed with ihp
          1. region m:1-141 [70632] picpiclink
    2. Sigma2 adaptin (clathrin coat assembly protein AP17) [75524]
      1. Mouse (Mus musculus) [TaxId: 10090] [75525] (1)
        1. 1gw5 picpicxrefxrefxref
          complexed with ihp
          1. chain s [70633] picpiclink
  4. SRP alpha N-terminal domain-like [90019] (2)
    1. Srx domain of the signal recognition particle receptor alpha-subunit [90020]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [90021] (1)
        1. 1nrj picpicxref
          complexed with edo, gtp, mg
          1. chain a [86124] picpiclink
    2. Signal recognition particle receptor alpha subunit, N-terminal domain [143735]
      1. Human (Homo sapiens) [TaxId: 9606] [143736] (2)
        SQ P08240 1-129
        1. 2fh5 picpicxref
          complexed with gtp, mg
          1. region a:1-129 [133477] picpiclink
        2. 2go5 picpicxrefxrefxref
          automatically matched to 2FH5 A:1-129
          1. region 1:1-129 [135430] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk