Structural Classification of Proteins
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Protein: TRAPPC5, similar to trafficking protein particle complex 5 from Zebrafish (Brachydanio rerio) [TaxId: 7955]

SQ Q6DGL5 21-188

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ligand-binding domain in the NO signalling and Golgi transport [111125]
    an N-terminal helical bundle and the C-terminal alpha-beta(2)-alpha-beta(2) subdomain enclose a ligand-binding cavity
  4. Superfamily: Ligand-binding domain in the NO signalling and Golgi transport [111126]
    link to SUPERFAMILY database - Superfamily
  5. Family: TRAPP components [118076]
    Pfam 04051; form homo- and hetero-dimers with the first two helices of one subunit complementing the fold of the other subunit to the H-NOX domain fold
  6. Protein: TRAPPC5, similar to trafficking protein particle complex 5 [160687]
  7. Species: Zebrafish (Brachydanio rerio) [TaxId: 7955] [160688]
    SQ Q6DGL5 21-188

PDB Entry Domains:

  1. 2j3w picpicxrefxref
    complexed with p1l
    1. region b:21-188 [145643] picpiclink
  2. 2j3w picpicxrefxref
    automatically matched to 2J3W B:21-188
    complexed with p1l
    1. region f:22-188 [145644] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk