Structural Classification of Proteins
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Protein: Papain from Papaya (Carica papaya) [TaxId: 3649]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Cysteine proteinases [54000]
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. Superfamily: Cysteine proteinases [54001]
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
    link to SUPERFAMILY database - Superfamily
  5. Family: Papain-like [54002]
  6. Protein: Papain [54005]
  7. Species: Papaya (Carica papaya) [TaxId: 3649] [54006]

PDB Entry Domains:

  1. 1khq picpic
    complexed with glm
    1. chain a [90964] picpiclink
  2. 1ppn picpic
    complexed with moh, o o
    1. chain a [37004] picpiclink
  3. 1cvz picpic
    complexed with c48
    1. chain a [37005] picpiclink
  4. 9pap picpic
    complexed with cyo, moh
    1. chain a [37006] picpiclink
  5. 1pip picpic
    complexed with nit, sin
    1. chain a [37007] picpiclink
  6. 1ppd picpic
    complexed with seo
    1. chain a [37008] picpiclink
  7. 1khp picpic
    complexed with glm
    1. chain a [90963] picpiclink
  8. 1ppp picpic
    complexed with e6c, moh
    1. chain a [37009] picpiclink
  9. 1pe6 picpic
    complexed with e6c, moh
    1. chain a [37010] picpiclink
  10. 1bp4 picpic
    complexed with ald
    1. chain a [37011] picpiclink
  11. 1pop picpic
    complexed with moh
    1. chain a [37013] picpiclink
  12. 1stf picpicxref
    complexed with cbm; mutant
    1. chain e [37012] picpiclink
  13. 1bqi picpic
    complexed with sba
    1. chain a [37014] picpiclink
  14. 5pad picpic
    complexed with bzo, glm
    1. chain a [37017] picpiclink
  15. 1pad picpic
    1. chain a [37016] picpiclink
  16. 2pad picpic
    1. chain a [37015] picpiclink
  17. 4pad picpic
    complexed with tos
    1. chain a [37018] picpiclink
  18. 6pad picpic
    complexed with bzo
    1. chain a [37019] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk