Structural Classification of Proteins
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Protein: EndoU from African clawed frog (Xenopus laevis) [TaxId: 8355]

SQ Q8JFY9 6-289

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: EndoU-like [142876]
    comprises several helices and two three-stranded antiparallel beta-sheets; similar architecture to the RNase A-like fold (scop_cf 54075)
  4. Superfamily: EndoU-like [142877]
    similarity to the RNase A-like superfamily (scop_sf 54076) extends to the active site location and architecture; the two structural cores of the RNase A and EndoU superfamilies are interrelated by a topological permutation - transposition of two pereferial beta-strands, suggesting possible distant homology of the two superfamilies (and their unification in a hyperfamily)
    link to SUPERFAMILY database - Superfamily
  5. Family: Eukaryotic EndoU ribonuclease [142878]
    PfamB 010233; common fold decorated with additional structures
  6. Protein: EndoU [142879]
  7. Species: African clawed frog (Xenopus laevis) [TaxId: 8355] [142880]
    SQ Q8JFY9 6-289

PDB Entry Domains:

  1. 2c1w picpic
    complexed with po4
    1. region a:6-289 [129644] picpiclink
  2. 2c1w picpic
    automatically matched to 2C1W A:6-289
    complexed with po4
    1. region b:6-289 [129645] picpiclink
  3. 2c1w picpic
    automatically matched to 2C1W A:6-289
    complexed with po4
    1. region c:6-287 [129646] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk