Structural Classification of Proteins
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Family: PhzC/PhzF-like

Pfam 02567

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Diaminopimelate epimerase-like [54505]
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. Superfamily: Diaminopimelate epimerase-like [54506]
    duplication: consists of two similar domain swapped with C-terminal strands
    link to SUPERFAMILY database - Superfamily
  5. Family: PhzC/PhzF-like [89863]
    Pfam 02567

Protein Domains:

  1. Hypothetical protein YddE [89864]
    1. Escherichia coli [TaxId: 562] [89865] (3)
      SQ P37757
      structural genomics; NESG target ET25
      1. 1qy9 picpic
        Structural genomics target
        complexed with gol, hyd
        1. region a:3-129 [104645] picpiclink
        2. region a:130-297 [104646] picpiclink
        3. region b:3-129 [104647] picpiclink
        4. region b:130-297 [104648] picpiclink
        5. region c:2-129 [104649] picpiclink
        6. region c:130-297 [104650] picpiclink
        7. region d:1-129 [104651] picpiclink
        8. region d:130-297 [104652] picpiclink
      2. 1qya picpic
        Structural genomics target
        1. region a:1-129 [104653] picpiclink
        2. region a:130-297 [104654] picpiclink
        3. region b:1-129 [104655] picpiclink
        4. region b:130-297 [104656] picpiclink
      3. 1sdj picpic
        structural genomics; NESG target ET25
        complexed with so4
        1. region a:-10-129 [98807] picpiclink
        2. region a:130-299 [98808] picpiclink
  2. Hypothetical protein EF0119 [102852]
    1. Enterococcus faecalis [TaxId: 1351] [102853] (1)
      1. 1s7j picpic
        structural genomics
        1. chain a [98647] picpiclink
        2. chain b [98648] picpiclink
  3. Hypothetical protein PA4716 [110861]
    1. Pseudomonas aeruginosa [TaxId: 287] [110862] (1)
      SQ Q9HV82
      1. 1u0k picpic
        Structural genomics target
        1. region a:2-130 [107547] picpiclink
        2. region a:131-283 [107548] picpiclink
        3. region b:2-130 [107549] picpiclink
        4. region b:131-283 [107550] picpiclink
  4. Phenazine biosynthesis protein PhzF [117861]
    1. Pseudomonas fluorescens [TaxId: 294] [117862] (6)
      SQ Q51792
      1. 1xub picpic
        complexed with so4; mutant
        1. region a:1-128 [116060] picpiclink
        2. region a:129-278 [116061] picpiclink
      2. 1u1w picpic
        complexed with 3ha, act, gol
        1. region a:1-128 [112957] picpiclink
        2. region a:129-278 [112958] picpiclink
        3. region b:1-128 [112959] picpiclink
        4. region b:129-278 [112960] picpiclink
      3. 1u1v picpic
        complexed with gol, so4
        1. region a:1-128 [112955] picpiclink
        2. region a:129-278 [112956] picpiclink
      4. 1xua picpic
        complexed with hha
        1. region a:1-128 [116056] picpiclink
        2. region a:129-278 [116057] picpiclink
        3. region b:1-128 [116058] picpiclink
        4. region b:129-278 [116059] picpiclink
      5. 1u1x picpic
        complexed with hha
        1. region a:1-128 [112961] picpiclink
        2. region a:129-278 [112962] picpiclink
        3. region b:1-128 [112963] picpiclink
        4. region b:129-278 [112964] picpiclink
      6. 1t6k picpic
        complexed with so4
        1. region a:1-128 [112261] picpiclink
        2. region a:129-278 [112262] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk