Structural Classification of Proteins
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Protein: Hypothetical protein YddE from Escherichia coli [TaxId: 562]

SQ P37757
structural genomics; NESG target ET25

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Diaminopimelate epimerase-like [54505]
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. Superfamily: Diaminopimelate epimerase-like [54506]
    duplication: consists of two similar domain swapped with C-terminal strands
    link to SUPERFAMILY database - Superfamily
  5. Family: PhzC/PhzF-like [89863]
    Pfam 02567
  6. Protein: Hypothetical protein YddE [89864]
  7. Species: Escherichia coli [TaxId: 562] [89865]
    SQ P37757
    structural genomics; NESG target ET25

PDB Entry Domains:

  1. 1qy9 picpic
    Structural genomics target
    complexed with gol, hyd
    1. region a:3-129 [104645] picpiclink
    2. region a:130-297 [104646] picpiclink
    3. region b:3-129 [104647] picpiclink
    4. region b:130-297 [104648] picpiclink
    5. region c:2-129 [104649] picpiclink
    6. region c:130-297 [104650] picpiclink
    7. region d:1-129 [104651] picpiclink
    8. region d:130-297 [104652] picpiclink
  2. 1qya picpic
    Structural genomics target
    1. region a:1-129 [104653] picpiclink
    2. region a:130-297 [104654] picpiclink
    3. region b:1-129 [104655] picpiclink
    4. region b:130-297 [104656] picpiclink
  3. 1sdj picpic
    structural genomics; NESG target ET25
    complexed with so4
    1. region a:-10-129 [98807] picpiclink
    2. region a:130-299 [98808] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk