Structural Classification of Proteins
home mail help root up expand collapse

Protein: DinB homolog (DBH) from Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]

Lineage:

  1. Root: scop
  2. Class: Multi-domain proteins (alpha and beta) [56572]
    Folds consisting of two or more domains belonging to different classes
  3. Fold: DNA/RNA polymerases [56671]
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. Superfamily: DNA/RNA polymerases [56672]
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
    link to SUPERFAMILY database - Superfamily
  5. Family: Lesion bypass DNA polymerase (Y-family), catalytic domain [100888]
    contains a distinct 'fingers' domain possibly related to the C-terminal subdomain of hypothetical protein Ta1206 (1qw2)
  6. Protein: DinB homolog (DBH) [100889]
  7. Species: Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287] [100890]

PDB Entry Domains:

  1. 1jx4 picpicxref
    complexed with adi, ca, mg
    1. region a:1-240 [90379] picpiclink
  2. 1s9f picpicxrefxrefxrefxref
    automatically matched to d1jx4a2
    complexed with ca, ddy, mg
    1. region a:2-240 [118914] picpiclink
  3. 1s9f picpicxrefxrefxrefxref
    automatically matched to d1jx4a2
    complexed with ca, ddy, mg
    1. region b:2-240 [118916] picpiclink
  4. 1s9f picpicxrefxrefxrefxref
    automatically matched to d1jx4a2
    complexed with ca, ddy, mg
    1. region c:2-240 [118918] picpiclink
  5. 1s9f picpicxrefxrefxrefxref
    automatically matched to d1jx4a2
    complexed with ca, ddy, mg
    1. region d:2-240 [118920] picpiclink
  6. 2jej picpicxref
    automatically matched to d1jx4a2
    complexed with bzg, ca, dgt
    1. region a:2-240 [138285] picpiclink
  7. 1rys picpicxref
    complexed with atp, ca, edo, na
    1. region a:1-240 [98112] picpiclink
    2. region b:1-240 [98114] picpiclink
  8. 2asd picpicxrefxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dcp, ddg
    1. region a:2-240 [127249] picpiclink
  9. 2asd picpicxrefxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dcp, ddg
    1. region b:1002-1240 [127251] picpiclink
  10. 2rdi picpicxref
    automatically matched to d1jx4a2
    complexed with gol, peg
    1. region a:1-240 [151929] picpiclink
  11. 1s10 picpicxref
    complexed with ca, dcp
    1. region a:1-240 [98328] picpiclink
  12. 1s0o picpicxref
    complexed with ca, mg, ttp
    1. region a:1-240 [98297] picpiclink
    2. region b:1-240 [98299] picpiclink
  13. 2imw picpicxref
    automatically matched to d1jx4a2
    complexed with ca, dad, edo
    1. region p:2-240 [137520] picpiclink
  14. 2agq picpicxref
    automatically matched to d1jx4a2
    complexed with ca, doc, dtp, mg
    1. region a:2-240 [126736] picpiclink
  15. 2bq3 picpicxref
    automatically matched to d1jx4a2
    complexed with ca, gne
    1. region a:2-240 [128960] picpiclink
  16. 2uvv picpicxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dgt; mutant
    1. region a:1-240 [139985] picpiclink
  17. 2br0 picpicxref
    automatically matched to d1jx4a2
    complexed with ca, dg3, gne
    1. region a:2-240 [128974] picpiclink
  18. 1jxl picpicxref
    complexed with bro, ca, dg3, edo, mg
    1. region a:1-240 [90381] picpiclink
  19. 1n48 picpicxref
    complexed with 3dr, atp, ca
    1. region a:1-240 [91616] picpiclink
  20. 2uvw picpicxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dgt; mutant
    1. region a:1-240 [139987] picpiclink
  21. 2rdj picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, gol, tmp
    1. region a:1-240 [151931] picpiclink
  22. 2rdj picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, gol, tmp
    1. region b:1-240 [151933] picpiclink
  23. 2jef picpicxref
    automatically matched to d1jx4a2
    complexed with bzg, ca, dgt, doc
    1. region a:2-240 [138279] picpiclink
  24. 2c28 picpicxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dg3
    1. region a:2-240 [129661] picpiclink
  25. 2jeg picpicxref
    automatically matched to d1jx4a2
    complexed with bzg, ca, dgt, doc
    1. region a:2-240 [138281] picpiclink
  26. 2ibk picpicxref
    automatically matched to d1jx4a2
    complexed with bap, ca, edo, gol, pop
    1. region a:1-240 [147599] picpiclink
  27. 1ryr picpicxref
    complexed with atp, ca
    1. region a:1-240 [98110] picpiclink
  28. 2bqr picpicxref
    automatically matched to d1jx4a2
    complexed with ca, dtp, gne
    1. region a:2-240 [128966] picpiclink
  29. 1s97 picpicxref
    complexed with ca, dct
    1. region a:1-240 [98743] picpiclink
    2. region b:1-240 [98745] picpiclink
    3. region c:1-240 [98747] picpiclink
    4. region d:1-240 [98749] picpiclink
  30. 2j6u picpicxref
    automatically matched to d1jx4a2
    complexed with 6og, ca, dgt
    1. region a:5-243 [138094] picpiclink
  31. 1n56 picpicxref
    complexed with 3dr, atp, ca, mg
    1. region a:1-240 [91681] picpiclink
    2. region b:1-240 [91683] picpiclink
  32. 2r8i picpicxref
    automatically matched to d1jx4a2
    complexed with ca, dtp, p; mutant
    1. region a:1-240 [151722] picpiclink
  33. 2bqu picpicxref
    automatically matched to d1jx4a2
    complexed with ca, dad, gne
    1. region a:2-240 [128968] picpiclink
  34. 2jei picpicxref
    automatically matched to d1jx4a2
    complexed with bzg, ca, dgt
    1. region a:2-240 [138283] picpiclink
  35. 1s0m picpicxref
    complexed with atp, bpa, ca, mg
    1. region a:1-240 [98291] picpiclink
    2. region b:1-240 [98293] picpiclink
  36. 2r8h picpicxref
    automatically matched to d1jx4a2
    complexed with ca, dgt, p; mutant
    1. region a:1-240 [151720] picpiclink
  37. 2j6s picpicxref
    automatically matched to d1jx4a2
    complexed with 6og, ca, dtp
    1. region a:1-240 [138090] picpiclink
  38. 2c22 picpicxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dgt
    1. region a:2-240 [129656] picpiclink
  39. 2agp picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, dgt, doc, mg
    1. region a:2-240 [126732] picpiclink
  40. 2agp picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, dgt, doc, mg
    1. region b:2-240 [126734] picpiclink
  41. 2j6t picpicxref
    automatically matched to d1jx4a2
    complexed with 6og, ca, dtp
    1. region a:2-240 [138092] picpiclink
  42. 2r8g picpicxref
    automatically matched to d1jx4a2
    complexed with ca, dgt, p; mutant
    1. region a:1-240 [151718] picpiclink
  43. 2ago picpicxref
    automatically matched to d1jx4a2
    complexed with ca, mg, pop
    1. region a:2-240 [126730] picpiclink
  44. 2asj picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, ddg
    1. region a:2-240 [127255] picpiclink
  45. 2asj picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, ddg
    1. region b:1002-1240 [127257] picpiclink
  46. 2c2d picpicxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dtp
    1. region a:2-240 [129665] picpiclink
  47. 2uvu picpicxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dgt; mutant
    1. region a:1-240 [139983] picpiclink
  48. 1s0n picpicxref
    complexed with ca, dcp
    1. region a:1-240 [98295] picpiclink
  49. 2va2 picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, dct, dft
    1. region a:1-240 [152816] picpiclink
  50. 2va2 picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, dct, dft
    1. region b:1-240 [152818] picpiclink
  51. 2asl picpicxrefxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, doc
    1. region a:2-240 [127259] picpiclink
  52. 2asl picpicxrefxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, doc
    1. region b:1002-1240 [127261] picpiclink
  53. 2atl picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, dcp, ddg
    1. region a:2-240 [127297] picpiclink
  54. 2atl picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, dcp, ddg
    1. region b:1002-1240 [127299] picpiclink
  55. 2c2r picpicxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dct, doc
    1. region a:2-240 [129681] picpiclink
  56. 2uvr picpicxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dgt; mutant
    1. region a:1-240 [139981] picpiclink
  57. 2va3 picpicxref
    automatically matched to d1jx4a2
    complexed with ca, dft, dgt
    1. region a:1-240 [152820] picpiclink
  58. 2c2e picpicxref
    automatically matched to d1jx4a2
    complexed with 8og, ca, dcp
    1. region a:2-240 [129667] picpiclink
  59. 2v9w picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, dct, dft
    1. region a:1-240 [152812] picpiclink
  60. 2v9w picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, dct, dft
    1. region b:1-240 [152814] picpiclink
  61. 2au0 picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, ddg
    1. region a:2-240 [127319] picpiclink
  62. 2au0 picpicxrefxref
    automatically matched to d1jx4a2
    complexed with ca, ddg
    1. region b:1002-1240 [127321] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk