Structural Classification of Proteins
home mail help root up expand collapse

Protein: Bacteriorhodopsin from Archaeon Halobacterium salinarum [TaxId: 2242]

SQ P02945 17-245

Lineage:

  1. Root: scop
  2. Class: Membrane and cell surface proteins and peptides [56835]
    Does not include proteins in the immune system
  3. Fold: Family A G protein-coupled receptor-like [81322]
    core: up-and-down bundle of seven transmembrane helices tilted 20 degrees with respect to the plane of the membrane
  4. Superfamily: Family A G protein-coupled receptor-like [81321]
    link to SUPERFAMILY database - Superfamily
  5. Family: Bacteriorhodopsin-like [81319]
  6. Protein: Bacteriorhodopsin [56871]
    a light-driven proton pump
  7. Species: Archaeon Halobacterium salinarum [TaxId: 2242] [56873]
    SQ P02945 17-245

PDB Entry Domains:

  1. 1m0k picpic
    K intermediate
    complexed with li1, ret, squ
    1. chain a [78344] picpiclink
  2. 1m0l picpic
    complexed with li1, ret, squ
    1. chain a [78345] picpiclink
  3. 1m0m picpic
    M1 intermediate
    complexed with li1, ret, squ
    1. chain a [78346] picpiclink
  4. 2ntu picpic
    automatically matched to d1cwqa_
    complexed with ret
    1. region a:8-231 [138595] picpiclink
  5. 2ntw picpic
    automatically matched to d1cwqa_
    complexed with ret
    1. region a:8-231 [138596] picpiclink
  6. 1c3w picpic
    complexed with li1, ret, squ
    1. chain a [43405] picpiclink
  7. 1p8h picpic
    complexed with li1, ret, squ
    1. chain a [87944] picpiclink
  8. 1f50 picpic
    complexed with li1, ret, squ; mutant
    1. chain a [43406] picpiclink
  9. 1kgb picpic
    complexed with li1, ret
    1. chain a [68581] picpiclink
  10. 1o0a picpic
    L intermediate
    complexed with li1, ret, squ
    1. chain a [86526] picpiclink
  11. 1pxr picpic
    complexed with ret; mutant
    1. chain a [95297] picpiclink
    2. chain b [95298] picpiclink
  12. 1c8r picpic
    complexed with li1, ret, squ; mutant
    1. chain a [43407] picpiclink
  13. 1f4z picpic
    complexed with li1, ret, squ; mutant
    1. chain a [43408] picpiclink
  14. 1p8u picpic
    complexed with li1, ret, squ; mutant
    1. chain a [87983] picpiclink
  15. 1kg9 picpic
    a "mock-trapped" early-M intermediate
    complexed with li1, ret
    1. chain a [68580] picpiclink
  16. 1py6 picpic
    complexed with ret
    1. chain a [95327] picpiclink
    2. chain b [95328] picpiclink
  17. 1p8i picpic
    complexed with li1, ret, squ; mutant
    1. chain a [87945] picpiclink
  18. 1qhj picpic
    complexed with ph1, ret
    1. chain a [43409] picpiclink
  19. 1mgy picpic
    complexed with br, k, li1, ret; mutant
    1. chain a [84959] picpiclink
  20. 1jv6 picpic
    complexed with li1, ret; mutant
    1. chain a [67346] picpiclink
  21. 1kg8 picpic
    an early-M intermediate
    complexed with li1, ret
    1. chain a [68579] picpiclink
  22. 1s53 picpic
    complexed with ret; mutant
    1. chain a [98521] picpiclink
    2. chain b [98522] picpiclink
  23. 1s51 picpic
    complexed with ret; mutant
    1. chain a [98517] picpiclink
    2. chain b [98518] picpiclink
  24. 1kme picpic
    complexed with glc, ret, squ
    1. chain a [68692] picpiclink
    2. chain b [68693] picpiclink
  25. 1qkp picpic
    complexed with ret
    1. chain a [43411] picpiclink
  26. 1q5j picpic
    complexed with ret; mutant
    1. chain a [95898] picpiclink
    2. chain b [95899] picpiclink
  27. 1xji picpic
    automatically matched to d1cwqa_
    complexed with c14, cps, d10, d12, oct, ret
    1. region a:8-230 [122034] picpiclink
  28. 1pxs picpic
    complexed with ret; mutant
    1. chain a [95299] picpiclink
    2. chain b [95300] picpiclink
  29. 1s8j picpic
    complexed with li1, no3, ret; mutant
    1. chain a [105372] picpiclink
  30. 1s8l picpic
    complexed with li1, ret; mutant
    1. chain a [105373] picpiclink
  31. 1q5i picpic
    complexed with ret; mutant
    1. chain a [95896] picpiclink
    2. chain b [95897] picpiclink
  32. 1jv7 picpic
    complexed with li1, ret; mutant
    1. chain a [67347] picpiclink
  33. 1cwq picpic
    M intermediate structure (A) superimposed on the ground state structure (B)
    complexed with hex, oct, ret, trd, und
    1. chain a [43412] picpiclink
    2. chain b [43413] picpiclink
  34. 1qko picpic
    complexed with ret
    1. chain a [43414] picpiclink
  35. 1s54 picpic
    complexed with ret; mutant
    1. chain a [98523] picpiclink
    2. chain b [98524] picpiclink
  36. 1e0p picpic
    L intermediate
    complexed with ret
    1. chain a [43416] picpiclink
    2. chain b [43417] picpiclink
  37. 1s52 picpic
    complexed with ret; mutant
    1. chain a [98519] picpiclink
    2. chain b [98520] picpiclink
  38. 1c8s picpic
    complexed with li1, ret, squ; mutant
    1. chain a [43410] picpiclink
  39. 1tn0 picpic
    complexed with ret; mutant
    1. chain a [112523] picpiclink
    2. chain b [112524] picpiclink
  40. 1tn5 picpic
    complexed with ret; mutant
    1. chain a [112525] picpiclink
    2. chain b [112526] picpiclink
  41. 1x0i picpic
    automatically matched to d1cwqa_
    complexed with l2p, l3p, ret, so4
    1. region 1:8-233 [121548] picpiclink
  42. 1iw6 picpic
    ground state
    complexed with gal, glc, l2p, l3p, man, ret
    1. chain a [76865] picpiclink
  43. 1vjm picpic
    complexed with ret
    1. chain a [100824] picpiclink
  44. 1iw9 picpic
    complexed with gal, glc, l2p, l3p, man, ret
    1. chain a [90711] picpiclink
  45. 1brx picpic
    complexed with ret
    1. chain a [43415] picpiclink
  46. 1dze picpic
    M intermediate trapped at 100K
    complexed with gal, glc, l1p, l2p, l3p, l4p, man, ret
    1. chain a [43419] picpiclink
  47. 1x0s picpic
    automatically matched to d1cwqa_
    complexed with gal, glc, l2p, l3p, man, ret, so4
    1. region a:8-231 [121572] picpiclink
  48. 1ucq picpic
    complexed with gal, glc, l2p, l3p, man, ret
    1. chain a [99187] picpiclink
  49. 1x0k picpic
    automatically matched to d1cwqa_
    complexed with gal, glc, l2p, l3p, man, ret
    1. region 1:8-231 [121549] picpiclink
  50. 1qm8 picpic
    complexed with gal, glc, l1p, l2p, l3p, l4p, man, ret
    1. chain a [43420] picpiclink
  51. 1ixf picpic
    K intermediate
    complexed with gal, glc, l2p, l3p, man, ret
    1. chain a [76908] picpiclink
  52. 1ap9 picpic
    complexed with ret
    1. chain a [43418] picpiclink
  53. 1brr picpic
    complexed with arc, gas, glc, man, oct, ret
    1. chain a [43421] picpiclink
    2. chain b [43422] picpiclink
    3. chain c [43423] picpiclink
  54. 1fbb picpic
    complexed with ret
    1. chain a [43425] picpiclink
  55. 1fbk picpic
    complexed with ret; mutant
    1. chain a [43426] picpiclink
  56. 1at9 picpic
    complexed with ret
    1. chain a [43424] picpiclink
  57. 1r84 picpic
    complexed with ret
    1. chain a [97218] picpiclink
  58. 1r2n picpic
    complexed with ret
    1. chain a [96873] picpiclink
  59. 2at9 picpic
    complexed with 2dp, ret
    1. chain a [43427] picpiclink
  60. 1l0m picpic
    a solution structure
    mutant
    1. chain a [73402] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk