Structural Classification of Proteins
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Family: Rhodopsin-like

Individual TM segments have a number of kinks and distortions

Lineage:

  1. Root: scop
  2. Class: Membrane and cell surface proteins and peptides [56835]
    Does not include proteins in the immune system
  3. Fold: Family A G protein-coupled receptor-like [81322]
    core: up-and-down bundle of seven transmembrane helices tilted 20 degrees with respect to the plane of the membrane
  4. Superfamily: Family A G protein-coupled receptor-like [81321]
    link to SUPERFAMILY database - Superfamily
  5. Family: Rhodopsin-like [81320]
    Individual TM segments have a number of kinks and distortions

Protein Domains:

  1. Rhodopsin [56876]
    1. Cow (Bos taurus) [TaxId: 9913] [56877] (12)
      SQ P02699
      1. 1u19 picpic
        complexed with ace, hg, htg, hto, man, nag, ply, ret, zn
        1. chain a [112953] picpiclink
        2. chain b [112954] picpiclink
      2. 1gzm picpic
        complexed with ace, bma, c8e, lda, nag, pef, plm, ret, zn
        1. chain a [90533] picpiclink
        2. chain b [90534] picpiclink
      3. 2g87 picpic
        automatically matched to d1f88a_
        complexed with ace, bma, hg, htg, hto, man, nag, plm, ret, zn
        1. region a:1-348 [134767] picpiclink
      4. 2g87 picpic
        automatically matched to d1f88a_
        complexed with ace, bma, hg, htg, hto, man, nag, plm, ret, zn
        1. region b:1-348 [134768] picpiclink
      5. 1l9h picpic
        complexed with ace, bng, hg, hto, man, nag, ply, ret, zn
        1. chain a [73720] picpiclink
        2. chain b [73721] picpiclink
      6. 1hzx picpic
        complexed with ace, bng, hg, hto, man, nag, ply, ret, zn
        1. chain a [61466] picpiclink
        2. chain b [61467] picpiclink
      7. 1f88 picpic
        complexed with hg, man, nag, ret, zn
        1. chain a [43429] picpiclink
        2. chain b [43430] picpiclink
      8. 2hpy picpic
        automatically matched to d1f88a_
        complexed with ace, bma, hg, htg, hto, man, nag, plm, ret, zn
        1. region a:1-348 [136653] picpiclink
      9. 2hpy picpic
        automatically matched to d1f88a_
        complexed with ace, bma, hg, htg, hto, man, nag, plm, ret, zn
        1. region b:1-348 [136654] picpiclink
      10. 1tqk picpic
        1. chain a [107234] picpiclink
      11. 1ln6 picpic
        complexed with ret
        1. chain a [74044] picpiclink
      12. 1jfp picpic
        dark adapted
        complexed with ret
        1. chain a [66645] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk