Structural Classification of Proteins
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Family: A20-like zinc finger

Pfam 01754

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Glucocorticoid receptor-like (DNA-binding domain) [57715]
    alpha+beta metal(zinc)-bound fold
  4. Superfamily: Glucocorticoid receptor-like (DNA-binding domain) [57716]
    link to SUPERFAMILY database - Superfamily
  5. Family: A20-like zinc finger [144187]
    Pfam 01754

Protein Domains:

  1. RabGEF1 (Rabex-5), ubiquitin-binding domain [144188]
    binds to ubiquitin with the extended C-terminal helix
    1. Cow (Bos taurus) [TaxId: 9913] [144189] (4)
      SQ O18973 14-73
      1. 2fif picpicxrefxrefxref
        automatically matched to 2FID B:14-73
        complexed with so4, zn
        1. region b:15-73 [133519] picpiclink
      2. 2fif picpicxrefxrefxref
        automatically matched to 2FID B:14-73
        complexed with so4, zn
        1. region d:16-73 [133521] picpiclink
      3. 2fif picpicxrefxrefxref
        automatically matched to 2FID B:14-73
        complexed with so4, zn
        1. region f:17-72 [133523] picpiclink
      4. 2fid picpicxref
        complexed with zn
        1. region b:14-73 [133517] picpiclink
    2. Human (Homo sapiens) [TaxId: 9606] [144190] (5)
      SQ Q9UJ41 17-74
      1. 2c7n picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C7M A:18-75
        complexed with zn
        1. region a:18-73 [130069] picpiclink
      2. 2c7n picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C7M A:18-75
        complexed with zn
        1. region c:17-73 [130071] picpiclink
      3. 2c7n picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C7M A:18-75
        complexed with zn
        1. region g:17-71 [130074] picpiclink
      4. 2c7n picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2C7M A:18-75
        complexed with zn
        1. region i:17-74 [130076] picpiclink
      5. 2c7m picpicxref
        complexed with zn
        1. region a:18-75 [130067] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk