Family: LIM domain

duplication: contains two (sub)domains of this fold

Lineage:

1. Root: scop
2. Class: Small proteins [56992]
   Usually dominated by metal ligand, heme, and/or disulfide bridges
3. Fold: Glucocorticoid receptor-like (DNA-binding domain) [57715]
   alpha+beta metal(zinc)-bound fold
4. Superfamily: Glucocorticoid receptor-like (DNA-binding domain) [57716]
   uperfamily
5. Family: LIM domain [57736]
   duplication: contains two (sub)domains of this fold

Protein Domains:

1. Cysteine-rich (intestinal) protein, CRP, CRIP [57737]
   1. Chicken (Gallus gallus) [TaxId: 9031] [57738] (2)
   2. Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934] [57739] (4)
   3. Rat (Rattus rattus) [TaxId: 10117] [57740] (1)
   4. Human (Homo sapiens) [TaxId: 9606] [144160] (2)
      SQ P52943 1-30! SQ P52943 31-63
      CRP2
2. Pinch (particularly interesting new Cys-His) protein [57741]
   1. Human (Homo sapiens) [TaxId: 9606] [57742] (8)
3. Rhombotin-2 (Lmo2) [90203]
   1. Mouse (Mus musculus) [TaxId: 10090] [90204] (1)
4. LIM only 4 (Lmo4) [90205]
   1. Mouse (Mus musculus) [TaxId: 10090] [90206] (2)
      SQ P61969 19-152
5. Actin-binding LIM protein 2, abLIM2 [111441]
   1. Human (Homo sapiens) [TaxId: 9606] [111442] (2)
      SQ Q6H8Q1 73-140, 212-271
6. Four and a half LIM domains protein 2, FHL2 [144161]
   Skeletal muscle lim-protein 3
   1. Human (Homo sapiens) [TaxId: 9606] [144162] (6)
      SQ Q14192 128-159! SQ Q14192 162-186! SQ Q14192 187-218! SQ Q14192 221-249! SQ Q14192 250-279! SQ Q14192 98-127
7. Four and a half LIM domains protein 1, FHL-1 [144163]
   Skeletal muscle lim-protein 1
   1. Human (Homo sapiens) [TaxId: 9606] [144164] (7)
      SQ Q13642 128-159! SQ Q13642 161-185! SQ Q13642 186-216! SQ Q13642 39-66! SQ Q13642 67-97! SQ Q13642 90-127! SQ Q13642 98-127
8. Eplin, LIMA1 [144165]
   Epithelial protein lost in neoplasm
   1. Human (Homo sapiens) [TaxId: 9606] [144166] (2)
      SQ Q9UHB6 381-417! SQ Q9UHB6 416-457
9. Four and a half LIM domains 3, FHL3 [144167]
   Skeletal muscle lim-protein 2
   1. Human (Homo sapiens) [TaxId: 9606] [144168] (4)
      SQ Q13643 127-159! SQ Q13643 152-186! SQ Q13643 187-218! SQ Q13643 98-126
10. PDZ and LIM domain protein 5, Enigma [144169]
    1. Human (Homo sapiens) [TaxId: 9606] [144170] (2)
       SQ Q96HC4 400-444! SQ Q96HC4 445-476
11. PDZ and LIM domain protein 1 Elfin [144171]
    C-terminal LIM domain protein 1
    1. Human (Homo sapiens) [TaxId: 9606] [144172] (2)
       SQ O00151 249-279! SQ O00151 280-314
12. Nedd9 interacting protein with calponin homology, NICAL (MICAL1) [144173]
    1. Human (Homo sapiens) [TaxId: 9606] [144174] (2)
       SQ Q8TDZ2 687-722! SQ Q8TDZ2 723-755
13. Leupaxin [144175]
    1. Human (Homo sapiens) [TaxId: 9606] [144176] (2)
       SQ O60711 260-295! SQ O60711 296-327
14. Thyroid receptor interacting protein 6, TRIP6 [144177]
    1. Human (Homo sapiens) [TaxId: 9606] [144178] (4)
       SQ Q15654 279-305! SQ Q15654 306-337! SQ Q15654 363-396! SQ Q15654 364-396
15. Actin-binding LIM protein 3, abLIM-3 [144179]
    1. Human (Homo sapiens) [TaxId: 9606] [144180] (2)
       SQ O94929 141-176! SQ O94929 177-207
16. Four and a half LIM domains protein 5, FHL-5 [144181]
    1. Human (Homo sapiens) [TaxId: 9606] [144182] (2)
       SQ Q5TD97 222-250! SQ Q5TD97 251-284
17. Lim domain kinase 2 [144183]
    1. Human (Homo sapiens) [TaxId: 9606] [144184] (2)
       SQ P53671 62-95! SQ P53671 96-129
18. PDZ and LIM domain protein 3, PDLIM3 [144185]
    Alpha-actinin-2-associated LIM protein
    1. Mouse (Mus musculus) [TaxId: 10090] [144186] (2)
       SQ O70209 270-301! SQ O70209 271-301

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk