Structural Classification of Proteins
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Family: RBP12 subunit of RNA polymerase II

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Rubredoxin-like [57769]
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. Superfamily: RNA polymerase subunits [63393]
    link to SUPERFAMILY database - Superfamily
  5. Family: RBP12 subunit of RNA polymerase II [64576]

Protein Domains:

  1. RBP12 subunit of RNA polymerase II [64577]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64578] (30)
      SQ P40422; part of multichain biological unit
      1. 1twf picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mn, utp, zn
        1. chain l [112737] picpiclink
      2. 1i50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mn, zn
        1. chain l [61766] picpiclink
      3. 1k83 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ilx, mn, trx, zn
        1. chain l [68287] picpiclink
      4. 3cqz picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with ilx, trx, zn
        1. region l:26-70 [156935] picpiclink
      5. 1i3q picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, zn
        1. chain l [61619] picpiclink
      6. 2nvq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with dut, mg, zn
        1. region l:25-70 [138646] picpiclink
      7. 1twc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with gtp, mn, zn
        1. chain l [112723] picpiclink
      8. 1twa picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with atp, mn, zn
        1. chain l [112708] picpiclink
      9. 1i6h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, zn
        1. chain l [61843] picpiclink
      10. 1twh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with atp, mn, zn
        1. chain l [112763] picpiclink
      11. 2r7z picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with cpt, mg, zn
        1. region l:25-70 [151666] picpiclink
      12. 2r92 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with mg, zn
        1. region l:25-70 [151753] picpiclink
      13. 1twg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ctp, mn, zn
        1. chain l [112750] picpiclink
      14. 2nvy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with mn, zn
        1. region l:25-70 [138692] picpiclink
      15. 2r93 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with mg, zn
        1. region l:25-70 [151762] picpiclink
      16. 2e2i picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with dgt, mg, zn
        1. region l:25-70 [132006] picpiclink
      17. 2vum picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with bru, ilx, mg, trx, zn
        1. region l:25-70 [153556] picpiclink
      18. 2e2j picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with g2p, mg, zn
        1. region l:25-70 [132019] picpiclink
      19. 2b63 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with 5bu, mg, zn
        1. region l:25-70 [127931] picpiclink
      20. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with bru, mg, tt, zn
        1. region l:25-70 [138205] picpiclink
      21. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with bru, mg, tt, zn
        1. region x:25-70 [138221] picpiclink
      22. 2nvx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with dut, mg, zn
        1. region l:25-70 [138679] picpiclink
      23. 2nvt picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with g2p, mg, zn
        1. region l:25-70 [138659] picpiclink
      24. 2ja5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with bru, mg, zn
        1. region l:25-70 [138173] picpiclink
      25. 2ja8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with bru, mg, tt, zn
        1. region l:25-70 [138237] picpiclink
      26. 2b8k picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with zn
        1. region l:25-70 [128091] picpiclink
      27. 2ja6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with bru, mg, tt, zn
        1. region l:25-70 [138189] picpiclink
      28. 2yu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with mg, utp, zn
        1. region l:25-70 [140076] picpiclink
      29. 2e2h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with gtp, mg, zn
        1. region l:25-70 [131993] picpiclink
      30. 2nvz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3ql_
        complexed with mg, utp, zn
        1. region l:25-70 [138705] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk