Structural Classification of Proteins
home mail help root up expand collapse

Family: Ran binding protein zinc finger-like

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Rubredoxin-like [57769]
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. Superfamily: Ran binding protein zinc finger-like [90209]
    contains CxxxxC-x(n)-CxxC zinc-binding site; similar to the Sec23/24 zinc finger domain
    link to SUPERFAMILY database - Superfamily
  5. Family: Ran binding protein zinc finger-like [90210]

Protein Domains:

  1. Znf265, first zinc-finger domain [90211]
    1. Human (Homo sapiens) [TaxId: 9606] [90212] (1)
      1. 1n0z picpic
        complexed with zn; mutant
        1. chain a [85247] picpiclink
  2. Npl4 [90215]
    a ubiquitin-interacting domain
    1. Rat (Rattus norvegicus) [TaxId: 10116] [90216] (2)
      1. 1q5w picpicxref
        complexed with zn
        1. chain a [95945] picpiclink
      2. 1nj3 picpic
        complexed with zn
        1. chain a [85761] picpiclink
  3. MDM4 [144196]
    1. Human (Homo sapiens) [TaxId: 9606] [144197] (1)
      SQ O15151 300-340
      1. 2cr8 picpic
        complexed with zn
        1. region a:8-48 [130734] picpiclink
  4. MDM2 [144198]
    1. Human (Homo sapiens) [TaxId: 9606] [144199] (2)
      SQ Q00987 290-335
      1. 2c6a picpic
        complexed with zn
        1. region a:290-335 [129987] picpiclink
      2. 2c6b picpic
        automatically matched to 2C6A A:290-335
        complexed with zn
        1. region a:290-335 [129988] picpiclink
  5. Vacuolar protein-sorting-associated protein 36, VPS36 [161173]
    1. Saccharomyces cerevisiae [TaxId: 4932] [161174] (2)
      SQ Q06696 115-161
      1. 2j9u picpicxrefxref
        complexed with zn
        1. region b:115-161 [145677] picpiclink
      2. 2j9u picpicxrefxref
        automatically matched to 2J9U B:115-161
        complexed with zn
        1. region d:115-161 [145678] picpiclink
  6. Nuclear pore complex protein nup153 [161175]
    1. Human (Homo sapiens) [TaxId: 9606] [161176] (1)
      SQ P49790 722-750
      1. 2gqe picpic
        2nd ZnF domain
        complexed with zn
        1. region a:3-31 [147156] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk