Structural Classification of Proteins
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Protein: DNA polymerase lambda from Human (Homo sapiens) [TaxId: 9606]

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SAM domain-like [47768]
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily: PsbU/PolX domain-like [81585]
    contains one classic and one pseudo HhH motifs
    link to SUPERFAMILY database - Superfamily
  5. Family: DNA polymerase beta-like, second domain [81584]
    topological similarity to the N-terminal domain
  6. Protein: DNA polymerase lambda [101253]
  7. Species: Human (Homo sapiens) [TaxId: 9606] [101254]

PDB Entry Domains:

  1. 2bcq picpicxrefxref
    automatically matched to d1rzta2
    complexed with edo, mg, na, ppv
    1. region a:329-385 [128305] picpiclink
  2. 2bcr picpicxrefxref
    automatically matched to d1rzta2
    complexed with edo, mg, na, ppv
    1. region a:329-385 [128308] picpiclink
  3. 2pfn picpicxrefxref
    automatically matched to d1rzta2
    complexed with dup, mg, na; mutant
    1. region a:329-385 [139673] picpiclink
  4. 1xsn picpicxrefxref
    automatically matched to d1rzta2
    complexed with 2dt, d3t, edo, mg, na; mutant
    1. region a:329-385 [122283] picpiclink
  5. 2bcv picpicxrefxref
    automatically matched to d1rzta2
    complexed with mg, na, o2c, ttp
    1. region a:329-385 [128317] picpiclink
  6. 2pfo picpicxrefxref
    automatically matched to d1rzta2
    complexed with dup, edo, mg, mn, na; mutant
    1. region a:329-385 [139676] picpiclink
  7. 2pfp picpicxrefxref
    automatically matched to d1rzta2
    complexed with dcp, mg, na; mutant
    1. region a:329-385 [139679] picpiclink
  8. 1xsp picpicxrefxref
    automatically matched to d1rzta2
    complexed with na, ppv; mutant
    1. region a:329-385 [122286] picpiclink
  9. 3c5g picpicxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with 2dt, d3t, edo, mg, na; mutant
    1. region a:329-385 [155944] picpiclink
  10. 3c5g picpicxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with 2dt, d3t, edo, mg, na; mutant
    1. region b:329-385 [155947] picpiclink
  11. 2bcs picpicxrefxref
    automatically matched to d1rzta2
    complexed with mg, na, ppv
    1. region a:329-385 [128311] picpiclink
  12. 1rzt picpicxrefxref
    complexed with edo, na; mutant
    1. region a:329-385 [98225] picpiclink
    2. region e:329-385 [98228] picpiclink
    3. region i:329-385 [98231] picpiclink
    4. region m:329-385 [98234] picpiclink
  13. 1xsl picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with cac, mg, na
    1. region a:329-385 [122271] picpiclink
  14. 1xsl picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with cac, mg, na
    1. region e:329-385 [122274] picpiclink
  15. 1xsl picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with cac, mg, na
    1. region i:329-385 [122277] picpiclink
  16. 1xsl picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with cac, mg, na
    1. region m:329-385 [122280] picpiclink
  17. 2bcu picpicxrefxref
    automatically matched to d1rzta2
    complexed with na, ppv
    1. region a:329-385 [128314] picpiclink
  18. 3c5f picpicxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with na; mutant
    1. region a:329-385 [155938] picpiclink
  19. 3c5f picpicxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with na; mutant
    1. region b:329-385 [155941] picpiclink
  20. 2gws picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with cac, cl, edo, mg, na
    1. region a:329-385 [135814] picpiclink
  21. 2gws picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with cac, cl, edo, mg, na
    1. region e:329-385 [135817] picpiclink
  22. 2gws picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with cac, cl, edo, mg, na
    1. region i:329-385 [135820] picpiclink
  23. 2gws picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta2
    complexed with cac, cl, edo, mg, na
    1. region m:329-385 [135823] picpiclink
  24. 2pfq picpicxrefxref
    automatically matched to d1rzta2
    complexed with dcp, mg, mn, na, ppv; mutant
    1. region a:329-385 [139682] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk