Structural Classification of Proteins
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Protein: DNA polymerase lambda from Human (Homo sapiens) [TaxId: 9606]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Nucleotidyltransferase [81302]
    core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
  4. Superfamily: Nucleotidyltransferase [81301]
    link to SUPERFAMILY database - Superfamily
  5. Family: DNA polymerase beta-like [81300]
    insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain
  6. Protein: DNA polymerase lambda [102943]
  7. Species: Human (Homo sapiens) [TaxId: 9606] [102944]

PDB Entry Domains:

  1. 2bcq picpicxrefxref
    automatically matched to d1rzta3
    complexed with edo, mg, na, ppv
    1. region a:386-575 [128306] picpiclink
  2. 2bcr picpicxrefxref
    automatically matched to d1rzta3
    complexed with edo, mg, na, ppv
    1. region a:386-575 [128309] picpiclink
  3. 2pfn picpicxrefxref
    automatically matched to d1rzta3
    complexed with dup, mg, na; mutant
    1. region a:386-575 [139674] picpiclink
  4. 1xsn picpicxrefxref
    automatically matched to d1rzta3
    complexed with 2dt, d3t, edo, mg, na; mutant
    1. region a:386-575 [122284] picpiclink
  5. 2bcv picpicxrefxref
    automatically matched to d1rzta3
    complexed with mg, na, o2c, ttp
    1. region a:386-575 [128318] picpiclink
  6. 2pfo picpicxrefxref
    automatically matched to d1rzta3
    complexed with dup, edo, mg, mn, na; mutant
    1. region a:386-575 [139677] picpiclink
  7. 2pfp picpicxrefxref
    automatically matched to d1rzta3
    complexed with dcp, mg, na; mutant
    1. region a:386-575 [139680] picpiclink
  8. 1xsp picpicxrefxref
    automatically matched to d1rzta3
    complexed with na, ppv; mutant
    1. region a:386-575 [122287] picpiclink
  9. 3c5g picpicxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with 2dt, d3t, edo, mg, na; mutant
    1. region a:386-575 [155945] picpiclink
  10. 3c5g picpicxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with 2dt, d3t, edo, mg, na; mutant
    1. region b:386-575 [155948] picpiclink
  11. 2bcs picpicxrefxref
    automatically matched to d1rzta3
    complexed with mg, na, ppv
    1. region a:386-575 [128312] picpiclink
  12. 1rzt picpicxrefxref
    complexed with edo, na; mutant
    1. region a:386-575 [98226] picpiclink
    2. region e:386-575 [98229] picpiclink
    3. region i:386-575 [98232] picpiclink
    4. region m:386-575 [98235] picpiclink
  13. 1xsl picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with cac, mg, na
    1. region a:386-575 [122272] picpiclink
  14. 1xsl picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with cac, mg, na
    1. region e:386-575 [122275] picpiclink
  15. 1xsl picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with cac, mg, na
    1. region i:386-575 [122278] picpiclink
  16. 1xsl picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with cac, mg, na
    1. region m:386-575 [122281] picpiclink
  17. 2bcu picpicxrefxref
    automatically matched to d1rzta3
    complexed with na, ppv
    1. region a:386-575 [128315] picpiclink
  18. 3c5f picpicxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with na; mutant
    1. region a:386-575 [155939] picpiclink
  19. 3c5f picpicxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with na; mutant
    1. region b:386-575 [155942] picpiclink
  20. 2gws picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with cac, cl, edo, mg, na
    1. region a:386-575 [135815] picpiclink
  21. 2gws picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with cac, cl, edo, mg, na
    1. region e:386-575 [135818] picpiclink
  22. 2gws picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with cac, cl, edo, mg, na
    1. region i:386-575 [135821] picpiclink
  23. 2gws picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1rzta3
    complexed with cac, cl, edo, mg, na
    1. region m:386-575 [135824] picpiclink
  24. 2pfq picpicxrefxref
    automatically matched to d1rzta3
    complexed with dcp, mg, mn, na, ppv; mutant
    1. region a:386-575 [139683] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk