Structural Classification of Proteins
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Protein: Immunoglobulin light chain kappa variable domain, VL-kappa from Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: Immunoglobulin [48726]
    link to SUPERFAMILY database - Superfamily
  5. Family: V set domains (antibody variable domain-like) [48727]
  6. Protein: Immunoglobulin light chain kappa variable domain, VL-kappa [88519]
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. Species: Mouse (Mus musculus), cluster 3.1 [TaxId: 10090] [88527]

PDB Entry Domains:

  1. 1ors picpicxrefxrefxrefxref
    part of anti-VD potassium channel KVAP Fab 33H1
    1. region a:1-107 [87349] picpiclink
  2. 35c8 picpicxrefxrefxref
    part of catalytic Fab 5C8
    complexed with nox
    1. region l:1-107 [20296] picpiclink
  3. 25c8 picpicxrefxrefxref
    part of catalytic Fab 5C8
    complexed with gep
    1. region l:1-107 [20298] picpiclink
  4. 1cf8 picpicxrefxrefxref
    part of catalytic Fab HA-19A4 with a polyene cyclase activity
    complexed with cd, haz
    1. region l:1-107 [20378] picpiclink
  5. 15c8 picpicxrefxrefxref
    part of catalytic Fab 5C8
    1. region l:1-107 [20300] picpiclink
  6. 1hq4 picpicxrefxrefxref
    part of catalytic Fab HA-19A4 with a polyene cyclase activity
    complexed with cd
    1. region a:1-107 [83621] picpiclink
    2. region c:1-107 [83625] picpiclink
  7. 1iai picpicxrefxrefxrefxrefxrefxrefxref
    part of Fab 409.5.3
    1. region m:1-109 [20074] picpiclink
  8. 1ob1 picpicxrefxrefxrefxref
    part of anti-Pf MSP1 Fab
    complexed with cac
    1. region a:1-106a [86748] picpiclink
    2. region d:1-106a [86754] picpiclink
  9. 1orq picpicxrefxrefxrefxref
    part of anti-VD potassium channel KVAP Fab 6E1
    complexed with cd, k; mutant
    1. region a:1-108 [87344] picpiclink
  10. 1aif picpicxrefxrefxref
    part of Fab 409.5.3
    1. region a:1-109 [20076] picpiclink
    2. region l:1-109 [20078] picpiclink
  11. 1fig picpicxrefxrefxref
    part of catalytic antibody 1F7 with chorismate mutase activity
    complexed with tsa
    1. region l:1-108 [19922] picpiclink
  12. 1ken picpicxrefxrefxrefxrefxref
    part of Fab against influenza virus hemagglutinin
    complexed with man, nag
    1. region l:1-108 [72381] picpiclink
    2. region u:1-108 [72385] picpiclink
  13. 2a0l picpicxrefxrefxrefxref
    automatically matched to d1orsa1
    complexed with k
    1. region c:1-105 [125956] picpiclink
  14. 2a0l picpicxrefxrefxrefxref
    automatically matched to d1orsa1
    complexed with k
    1. region e:1-105 [125958] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk