Structural Classification of Proteins
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Protein: Alphanodavirus capsid protein from Nodamura virus [TaxId: 12288]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: Positive stranded ssRNA viruses [88633]
    link to SUPERFAMILY database - Superfamily
  5. Family: Nodaviridae-like VP [88638]
  6. Protein: Alphanodavirus capsid protein [49648]
  7. Species: Nodamura virus [TaxId: 12288] [49650]

PDB Entry Domains:

  1. 1nov picpic
    1. chain a [23326] picpiclink
    2. chain b [23327] picpiclink
    3. chain c [23328] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk