Structural Classification of Proteins
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Protein: Sobemovirus coat protein from SMV (Sesbania mosaic virus) [TaxId: 12558]

SQ Q9EB06

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: Positive stranded ssRNA viruses [88633]
    link to SUPERFAMILY database - Superfamily
  5. Family: Tombusviridae-like VP [88643]
  6. Protein: Sobemovirus coat protein [88644]
  7. Species: SMV (Sesbania mosaic virus) [TaxId: 12558] [49624]
    SQ Q9EB06

PDB Entry Domains:

  1. 1smv picpic
    complexed with ca
    1. chain a [23288] picpiclink
    2. chain b [23289] picpiclink
    3. chain c [23290] picpiclink
  2. 2vq0 picpic
    automatically matched to d1vaka_
    complexed with ca; mutant
    1. region a:73-268 [153422] picpiclink
  3. 2vq0 picpic
    automatically matched to d1vaka_
    complexed with ca; mutant
    1. region b:73-268 [153423] picpiclink
  4. 2vq0 picpic
    automatically matched to d1vaka_
    complexed with ca; mutant
    1. region c:73-268 [153424] picpiclink
  5. 1vak picpic
    deletion mutant
    1. chain a [113600] picpiclink
  6. 1vb4 picpic
    deletion mutant
    1. chain a [113603] picpiclink
  7. 1vb2 picpic
    deletion mutant
    1. chain a [113602] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk