Structural Classification of Proteins
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Protein: Diaminopimelate decarboxylase LysA from Mycobacterium tuberculosis [TaxId: 1773]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: PLP-binding barrel [51419]
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
    link to SUPERFAMILY database - Superfamily
  5. Family: Alanine racemase-like, N-terminal domain [51420]
  6. Protein: Diaminopimelate decarboxylase LysA [89457]
    most similar to eukaryotic ODC
  7. Species: Mycobacterium tuberculosis [TaxId: 1773] [89458]

PDB Entry Domains:

  1. 1hkv picpicxref
    complexed with lys, plp
    1. region a:46-310 [83560] picpiclink
    2. region b:46-310 [83562] picpiclink
  2. 1hkw picpicxref
    complexed with mse, so4
    1. region a:46-310 [83564] picpiclink
    2. region b:46-310 [83566] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk