Structural Classification of Proteins
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Protein: Diaminopimelate decarboxylase LysA from Escherichia coli [TaxId: 562]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: PLP-binding barrel [51419]
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
    link to SUPERFAMILY database - Superfamily
  5. Family: Alanine racemase-like, N-terminal domain [51420]
  6. Protein: Diaminopimelate decarboxylase LysA [89457]
    most similar to eukaryotic ODC
  7. Species: Escherichia coli [TaxId: 562] [102048]

PDB Entry Domains:

  1. 1knw picpicxref
    complexed with li, mes, plp, sul
    1. region a:32-278 [90970] picpiclink
  2. 1ko0 picpicxref
    complexed with lys, plp
    1. region a:32-278 [90972] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk