Structural Classification of Proteins
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Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from Escherichia coli [TaxId: 562]

SQ P06977

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
    link to SUPERFAMILY database - Superfamily
  5. Family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800]
    family members also share a common alpha+beta fold in C-terminal domain
  6. Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801]
  7. Species: Escherichia coli [TaxId: 562] [51802]
    SQ P06977

PDB Entry Domains:

  1. 1gad picpicxref
    complexed with nad
    1. region o:0-148,o:313-330 [29950] picpiclink
    2. region p:0-148,p:313-330 [29951] picpiclink
  2. 2vyn picpicxrefxrefxref
    automatically matched to d1dc3a1
    complexed with fmt, nad
    1. region a:0-147,a:312-329 [153707] picpiclink
  3. 2vyn picpicxrefxrefxref
    automatically matched to d1dc3a1
    complexed with fmt, nad
    1. region b:0-147,b:312-329 [153709] picpiclink
  4. 2vyn picpicxrefxrefxref
    automatically matched to d1dc3a1
    complexed with fmt, nad
    1. region c:0-147,c:312-329 [153711] picpiclink
  5. 1s7c picpicxref
    complexed with mes, so4
    1. region a:2-148,a:313-331 [105346] picpiclink
  6. 1gae picpicxref
    complexed with nad; mutant
    1. region o:0-148,o:313-330 [29954] picpiclink
    2. region p:0-148,p:313-330 [29955] picpiclink
  7. 2vyv picpicxrefxrefxref
    automatically matched to d1dc3a1
    complexed with 1gp, fmt, nad
    1. region a:0-147,a:312-329 [153715] picpiclink
  8. 2vyv picpicxrefxrefxref
    automatically matched to d1dc3a1
    complexed with 1gp, fmt, nad
    1. region b:0-147,b:312-329 [153717] picpiclink
  9. 2vyv picpicxrefxrefxref
    automatically matched to d1dc3a1
    complexed with 1gp, fmt, nad
    1. region c:0-147,c:312-329 [153719] picpiclink
  10. 1dc5 picpicxref
    1. region a:0-148,a:313-330 [29952] picpiclink
    2. region b:0-148,b:313-330 [29953] picpiclink
  11. 1dc6 picpicxref
    complexed with nad
    1. region a:0-148,a:313-330 [29956] picpiclink
    2. region b:0-148,b:313-330 [29957] picpiclink
  12. 1dc3 picpicxref
    1. region a:0-148,a:313-330 [29958] picpiclink
    2. region b:0-148,b:313-330 [29959] picpiclink
  13. 1dc4 picpicxref
    complexed with g3h
    1. region a:0-148,a:313-330 [29960] picpiclink
    2. region b:0-148,b:313-330 [29961] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk