Structural Classification of Proteins
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Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from Escherichia coli [TaxId: 562]

SQ P06977

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: FwdE/GAPDH domain-like [55346]
    core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1
  4. Superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347]
    N-terminal domain is the classic Rossmann-fold
    link to SUPERFAMILY database - Superfamily
  5. Family: GAPDH-like [55348]
    has many additional secondary structures
  6. Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [55349]
  7. Species: Escherichia coli [TaxId: 562] [55350]
    SQ P06977

PDB Entry Domains:

  1. 1gad picpicxref
    complexed with nad
    1. region o:149-312 [39865] picpiclink
    2. region p:149-312 [39866] picpiclink
  2. 2vyn picpicxrefxrefxref
    automatically matched to d1dc3a2
    complexed with fmt, nad
    1. region a:149-311 [153708] picpiclink
  3. 2vyn picpicxrefxrefxref
    automatically matched to d1dc3a2
    complexed with fmt, nad
    1. region b:149-311 [153710] picpiclink
  4. 2vyn picpicxrefxrefxref
    automatically matched to d1dc3a2
    complexed with fmt, nad
    1. region c:149-311 [153712] picpiclink
  5. 1s7c picpicxref
    complexed with mes, so4
    1. region a:149-312 [105347] picpiclink
  6. 1gae picpicxref
    complexed with nad; mutant
    1. region o:149-312 [39869] picpiclink
    2. region p:149-312 [39870] picpiclink
  7. 2vyv picpicxrefxrefxref
    automatically matched to d1dc3a2
    complexed with 1gp, fmt, nad
    1. region a:149-311 [153716] picpiclink
  8. 2vyv picpicxrefxrefxref
    automatically matched to d1dc3a2
    complexed with 1gp, fmt, nad
    1. region b:149-311 [153718] picpiclink
  9. 2vyv picpicxrefxrefxref
    automatically matched to d1dc3a2
    complexed with 1gp, fmt, nad
    1. region c:149-311 [153720] picpiclink
  10. 1dc5 picpicxref
    1. region a:149-312 [39867] picpiclink
    2. region b:149-312 [39868] picpiclink
  11. 1dc6 picpicxref
    complexed with nad
    1. region a:149-312 [39871] picpiclink
    2. region b:149-312 [39872] picpiclink
  12. 1dc3 picpicxref
    1. region a:149-312 [39873] picpiclink
    2. region b:149-312 [39874] picpiclink
  13. 1dc4 picpicxref
    complexed with g3h
    1. region a:149-312 [39875] picpiclink
    2. region b:149-312 [39876] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk