Protein: Putative shikimate dehydrogenase YdiB from Escherichia coli [TaxId: 562]

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar
4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
   uperfamily
5. Family: Aminoacid dehydrogenase-like, C-terminal domain [51883]
   extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site
6. Protein: Putative shikimate dehydrogenase YdiB [82305]
7. Species: Escherichia coli [TaxId: 562] [82306]

PDB Entry Domains:

1. 1vi2
   structural genomics
   complexed with nad, so4
   1. region a:107-288 [100726]
   2. region b:107-287 [100728]
2. 1npd
   structural genomics
   complexed with mse, nad
   1. region a:107-287 [80681]
   2. region b:107-288 [80683]
3. 1o9b
   complexed with mse, nad, po4
   1. region a:107-287 [81237]
   2. region b:107-287 [81239]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk