Structural Classification of Proteins
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Protein: Mitochondrial NAD(P)-dependent malic enzyme from Human (Homo sapiens) [TaxId: 9606]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
    link to SUPERFAMILY database - Superfamily
  5. Family: Aminoacid dehydrogenase-like, C-terminal domain [51883]
    extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site
  6. Protein: Mitochondrial NAD(P)-dependent malic enzyme [51898]
    includes C-terminal additional subdomains
  7. Species: Human (Homo sapiens) [TaxId: 9606] [51899]

PDB Entry Domains:

  1. 1pj3 picpicxref
    complexed with fum, mn, nad, pyr
    1. region a:280-573 [94726] picpiclink
    2. region b:1280-1573 [94728] picpiclink
    3. region c:2280-2573 [94730] picpiclink
    4. region d:3280-3573 [94732] picpiclink
  2. 1gz3 picpicxref
    complexed with atp, fum, mn, oxl; mutant
    1. region a:280-573 [83393] picpiclink
    2. region b:280-573 [83395] picpiclink
    3. region c:280-573 [83397] picpiclink
    4. region d:280-573 [83399] picpiclink
  3. 1gz4 picpicxref
    complexed with atp, fum, mn, mse, ttn
    1. region a:280-573 [70794] picpiclink
    2. region b:280-573 [70796] picpiclink
    3. region c:280-573 [70798] picpiclink
    4. region d:280-573 [70800] picpiclink
  4. 1pj2 picpicxref
    complexed with fum, mlt, mn, nai
    1. region a:280-573 [94718] picpiclink
    2. region b:1280-1573 [94720] picpiclink
    3. region c:2280-2573 [94722] picpiclink
    4. region d:3280-3573 [94724] picpiclink
  5. 1pj4 picpicxref
    complexed with atp, fum, mlt, mn
    1. region a:280-573 [94734] picpiclink
    2. region b:1280-1573 [94736] picpiclink
    3. region c:2280-2573 [94738] picpiclink
    4. region d:3280-3573 [94740] picpiclink
  6. 1do8 picpicxref
    complexed with mn, nad, oxl; mutant
    1. region a:280-573 [30289] picpiclink
    2. region b:280-573 [30290] picpiclink
    3. region c:280-573 [30291] picpiclink
    4. region d:280-573 [30292] picpiclink
  7. 1qr6 picpicxref
    complexed with nad; mutant
    1. region a:280-573 [30293] picpiclink
    2. region b:1280-1573 [30294] picpiclink
  8. 1efl picpicxref
    complexed with mg, nad, ttn
    1. region a:280-573 [30295] picpiclink
    2. region b:280-573 [30296] picpiclink
    3. region c:280-573 [30297] picpiclink
    4. region d:280-573 [30298] picpiclink
  9. 1efk picpicxref
    complexed with mak, mo1, nad
    1. region a:280-573 [30299] picpiclink
    2. region b:280-573 [30300] picpiclink
    3. region c:280-573 [30301] picpiclink
    4. region d:280-573 [30302] picpiclink
  10. 1pjl picpicxref
    complexed with lu, mse, nad
    1. region a:280-573 [88123] picpiclink
    2. region b:1280-1573 [88125] picpiclink
    3. region c:2280-2573 [88127] picpiclink
    4. region d:3280-3573 [88129] picpiclink
    5. region e:4280-4573 [88131] picpiclink
    6. region f:5280-5573 [88133] picpiclink
    7. region g:6280-6573 [88135] picpiclink
    8. region h:7280-7573 [88137] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk