Structural Classification of Proteins

Fold: HAD-like

: 3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: HAD-like [56783]
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456

Superfamilies:

HAD-like [56784] (25)
usually contains an insertion (sub)domain after strand 1
uperfamily
1. Probable phosphatase YrbI [69467] (1)
  the insertion subdomain is a beta-hairpin involved into tetramerisation
  1. Probable phosphatase YrbI [69468]
    1. Haemophilus influenzae, HI1679 [TaxId: 727] [69469] (2)
      1. 1k1e
        complexed with co, gol, hg, mes, so4
        
        chain a [67995]
        chain b [67996]
        chain c [67997]
        chain d [67998]
        chain e [67999]
        chain f [68000]
        chain g [68001]
        chain h [68002]
        chain i [68003]
        chain j [68004]
        chain k [68005]
        chain l [68006]
      2. 1j8d
        complexed with gol
        
        chain a [66433]
        chain b [66434]
        chain c [66435]
        chain d [66436]
2. HAD-related [56785] (3)
  the insertion subdomain is a 4-helical bundle
  1. L-2-Haloacid dehalogenase, HAD [56786]
    1. Pseudomonas sp., strain YL [TaxId: 306] [56787] (4)
      1. 1zrn
        complexed with acy; mutant
        
        chain a [43323]
      2. 1zrm
        complexed with bua; mutant
        
        chain a [43324]
      3. 1jud
        
        chain a [43325]
      4. 1qh9
        complexed with dla
        
        chain a [43326]
    2. Xanthobacter autotrophicus [TaxId: 280] [56788] (4)
      1. 1qq5
        complexed with fmt
        
        chain a [43327]
        chain b [43328]
      2. 1qq7
        complexed with cl
        
        chain a [43329]
        chain b [43330]
      3. 1qq6
        complexed with asm, cl
        
        chain a [43333]
        chain b [43334]
      4. 1aq6
        complexed with fmt
        
        chain a [43331]
        chain b [43332]
  2. Hypothetical protein PH0459 [142133]
    1. Archaeon Pyrococcus horikoshii [TaxId: 53953] [142134] (1)
      SQ O58216 1-230
      1. 1x42
        
        region a:1-230 [121677]
3. beta-Phosphoglucomutase-like [75173] (9)
  the insertion subdomain is a 4-helical bundle
  1. beta-Phosphoglucomutase [75174]
    1. Lactococcus lactis [TaxId: 1358] [75175] (8)
      1. 1o08
        complexed with g16, mg; mutant
        
        chain a [86525]
      2. 1o03
        complexed with g16, mg; mutant
        
        chain a [86507]
      3. 1zol
        automatically matched to d1lvha_
        complexed with mg
        
        region a:1-219 [125452]
      4. 1z4o
        automatically matched to d1lvha_
        complexed with gl1, mg
        
        region a:1-219 [124440]
      5. 1z4o
        automatically matched to d1lvha_
        complexed with gl1, mg
        
        region b:1-219 [124441]
      6. 1z4n
        automatically matched to d1lvha_
        complexed with gl1, mg
        
        region a:1-219 [124438]
      7. 1z4n
        automatically matched to d1lvha_
        complexed with gl1, mg
        
        region b:1-216 [124439]
      8. 1lvh
        phosphorylated enzyme
        complexed with asq, mg; mutant
        
        chain a [74282]
        chain b [74283]
  2. Phosphatase YniC [110504]
    1. Escherichia coli [TaxId: 562] [110505] (1)
      SQ P77247
      1. 1te2
        Structural genomics target
        complexed with 2pl, ca
        
        chain a [106792]
        chain b [106793]
  3. Phosphoglycolate phosphatase [142135]
    1. Lactobacillus plantarum [TaxId: 1590] [142136] (1)
      SQ Q88YA8 1-207
      1. 2hdo
        complexed with po4
        
        region a:1-207 [136345]
  4. N-acylneuraminate-9-phosphatase NANP [142137]
    1. Mouse (Mus musculus) [TaxId: 10090] [142138] (1)
      SQ Q9CPT3 1-247
      1. 2gfh
        complexed with cl, edo, na, po4
        
        region a:1-247 [135096]
  5. Hypothetical protein SP2064 [142139]
    1. Streptococcus pneumoniae [TaxId: 1313] [142140] (4)
      SQ Q97NG6 3-206
      1. 2go7
        complexed with cl, mg
        
        region a:3-206 [135434]
      2. 2go7
        automatically matched to 2GO7 A:3-206
        complexed with cl, mg
        
        region b:3-204 [135435]
      3. 2go7
        automatically matched to 2GO7 A:3-206
        complexed with cl, mg
        
        region c:3-204 [135436]
      4. 2go7
        automatically matched to 2GO7 A:3-206
        complexed with cl, mg
        
        region d:3-205 [135437]
  6. Hypothetical protein Atu0790 [142141]
    1. Agrobacterium tumefaciens [TaxId: 358] [142142] (1)
      SQ Q8UH93 3-224
      1. 2fdr
        complexed with mg
        
        region a:3-224 [133319]
  7. Phosphoglycolate phosphatase Gph [142143]
    1. Haemophilus somnus [TaxId: 731] [142144] (2)
      SQ Q0I1W8 1-224
      1. 2hsz
        complexed with act, cl, unl
        
        region a:1-224 [136726]
      2. 2hsz
        automatically matched to 2HSZ A:1-224
        complexed with act, cl, unl
        
        region b:1-224 [136727]
  8. predicted phosphatase SP0104 [142145]
    1. Streptococcus pneumoniae [TaxId: 1313] [142146] (1)
      SQ Q97T51 1-210
      1. 2ah5
        
        region a:1-210 [126742]
  9. Hypothetical protein CT1708 [142147]
    1. Chlorobium tepidum [TaxId: 1097] [142148] (1)
      SQ Q8KBS5 2-229
      1. 2hcf
        complexed with cl, mg
        
        region a:2-229 [136333]
4. YihX-like [56789] (3)
  the insertion subdomain is a 4-helical bundle
  1. Epoxide hydrolase, N-terminal domain [56790]
    has a lipid phosphatase activity
    1. Mouse (Mus musculus) [TaxId: 10090] [56791] (4)
      1. 1cr6
        
        region a:4-225 [43337]
        region b:4-225 [43338]
      2. 1cqz
        
        region a:4-225 [43339]
        region b:4-225 [43340]
      3. 1ek1
        complexed with ciu
        
        region a:4-225 [43335]
        region b:4-225 [43336]
      4. 1ek2
        complexed with cdu
        
        region a:4-225 [43341]
        region b:4-225 [43342]
    2. Human (Homo sapiens) [TaxId: 9606] [102303] (6)
      1. 1zd3
        automatically matched to d1vj5a1
        complexed with 15p, mg, nc4, po4
        
        region a:2-224 [124930]
      2. 1vj5
        complexed with ciu, mg, p6g, po4
        
        region a:2-225 [100799]
      3. 1s8o
        complexed with p6g
        
        region a:4-225 [98736]
      4. 1zd4
        automatically matched to d1vj5a1
        complexed with mg, nc6, po4
        
        region a:2-224 [124932]
      5. 1zd5
        automatically matched to d1vj5a1
        complexed with mg, nc7, po4
        
        region a:2-224 [124934]
      6. 1zd2
        automatically matched to d1vj5a1
        complexed with mg, nc3, po4
        
        region p:2-224 [124928]
  2. Putative phosphatase YihX [142149]
    1. Escherichia coli [TaxId: 562] [142150] (1)
      SQ P0A8Y3 1-197
      1. 2b0c
        complexed with g1p, mg
        
        region a:8-204 [127633]
5. Phosphonoacetaldehyde hydrolase-like [56792] (2)
  the insertion subdomain is a 4-helical bundle
  1. Phosphonoacetaldehyde hydrolase [56793]
    1. Bacillus cereus [TaxId: 1396] [56794] (6)
      SQ O31156
      1. 1swv
        complexed with mg; mutant
        
        chain a [112134]
        chain b [112135]
      2. 1sww
        complexed with mg, poa; mutant
        
        chain a [112136]
        chain b [112137]
      3. 1rql
        complexed with mg, vso
        
        chain a [97750]
        chain b [97751]
      4. 1rqn
        complexed with mg
        
        chain a [97752]
        chain b [97753]
      5. 1rdf
        complexed with esa, mg; mutant
        
        chain a [104884]
        chain b [104885]
        chain c [104886]
        chain d [104887]
        chain e [104888]
        chain f [104889]
      6. 1fez
        complexed with mg, wo4
        
        chain a [43343]
        chain b [43344]
        chain c [43345]
        chain d [43346]
  2. Putative hydrolase SP0805 [142151]
    1. Streptococcus pneumoniae [TaxId: 1313] [142152] (1)
      SQ Q97RK1 4-190
      1. 2fi1
        complexed with ca
        
        region a:4-190 [133508]
6. Phosphoserine phosphatase [64511] (2)
  the insertion subdomain is a 4-helical bundle
  1. Phosphoserine phosphatase [64512]
    1. Archaeon Methanococcus jannaschii [TaxId: 2190] [64513] (6)
      1. 1j97
        Phospho-aspartyl intermediate analogue
        complexed with bfd, mg, po4
        
        chain a [62753]
        chain b [62754]
      2. 1l7m
        PI complex
        complexed with mg, mse, po4
        
        chain a [73664]
        chain b [73665]
      3. 1l7n
        complexed with af3, alf, mg, mse, so4
        
        chain a [73666]
        chain b [73667]
      4. 1f5s
        complexed with mg, po4
        
        chain a [59656]
        chain b [59657]
      5. 1l7p
        complex with substrate
        complexed with mse, po4, sep; mutant
        
        chain a [73670]
        chain b [73671]
      6. 1l7o
        complexed with acy, mse, zn; mutant
        
        chain a [73668]
        chain b [73669]
    2. Human (Homo sapiens) [TaxId: 9606] [89645] (3)
      1. 1nnl
        complexed with ca, cl
        
        chain a [85906]
        chain b [85907]
      2. 1l8l
        complexed with apo; mutant
        
        chain a [84562]
        chain b [84563]
      3. 1l8o
        complexed with po4, ser; mutant
        
        chain a [84566]
        chain b [84567]
7. 5'(3')-deoxyribonucleotidase (dNT-2) [82382] (1)
  the insertion subdomain is a 4-helical bundle; dephosphorylates dUMP and dTMP
  1. 5'(3')-deoxyribonucleotidase (dNT-2) [82383]
    1. Human (Homo sapiens) [TaxId: 9606] [82384] (12)
      1. 1q92
        complexed with drm, gol, mg
        
        chain a [96250]
      2. 1q91
        complexed with dpb, mg, po4
        
        chain a [96249]
      3. 1z4k
        automatically matched to 1Z4I A:34-227
        complexed with mg, t3p; mutant
        
        region a:34-227 [124435]
      4. 1mh9
        complexed with mg, po4
        
        chain a [79118]
      5. 1z4j
        automatically matched to 1Z4I A:34-227
        complexed with gol, mg, u2p; mutant
        
        region a:34-227 [124434]
      6. 1z4m
        automatically matched to 1Z4I A:34-227
        complexed with gol, mg, u5p; mutant
        
        region a:34-227 [124437]
      7. 2jau
        automatically matched to d1z4ia1
        complexed with atm, mg, po4; mutant
        
        region a:34-227 [147952]
      8. 1z4l
        automatically matched to 1Z4I A:34-227
        complexed with mg, tmp; mutant
        
        region a:34-227 [124436]
      9. 1z4i
        complexed with gol, mg, ump; mutant
        
        region a:34-227 [124433]
      10. 2jaw
        automatically matched to d1z4ia1
        complexed with bvp, mg; mutant
        
        region a:34-227 [147953]
      11. 1z4p
        automatically matched to 1Z4I A:34-227
        complexed with dgp, mg; mutant
        
        region x:34-227 [124442]
      12. 1z4q
        automatically matched to 1Z4I A:34-227
        complexed with d4m, mg; mutant
        
        region a:34-227 [124443]
8. Homoserine kinase ThrH [102304] (1)
  the insertion subdomain is a rudiment 4-helical bundle
  1. Homoserine kinase ThrH [102305]
    1. Pseudomonas aeruginosa [TaxId: 287] [102306] (2)
      1. 1rku
        complexed with edo, mg
        
        chain a [97627]
        chain b [97628]
      2. 1rkv
        complexed with edo, mg, po4
        
        chain a [97629]
        chain b [97630]
9. Class B acid phosphatase, AphA [102307] (2)
  the insertion subdomain is a helical hairpin
  1. Class B acid phosphatase, AphA [102308]
    1. Escherichia coli [TaxId: 562] [102309] (15)
      SQ P32697 27-237
      1. 2b82
        automatically matched to d1n8na_
        complexed with adn, mg, po4
        
        region a:4-212 [128057]
      2. 2b82
        automatically matched to d1n8na_
        complexed with adn, mg, po4
        
        region b:4-212 [128058]
      3. 1rmt
        complexed with adn, mg
        
        chain a [111888]
        chain b [111889]
        chain c [111890]
        chain d [111891]
      4. 2heg
        automatically matched to d1rmta_
        complexed with bfd, mg
        
        region a:3-212 [147269]
      5. 2heg
        automatically matched to d1rmta_
        complexed with bfd, mg
        
        region b:3-212 [147270]
      6. 2hf7
        automatically matched to d1rmta_
        complexed with af3, mg
        
        region a:3-212 [147276]
      7. 2hf7
        automatically matched to d1rmta_
        complexed with af3, mg
        
        region b:3-212 [147277]
      8. 1n8n
        complexed with au3
        
        chain a [91706]
      9. 1rmy
        complexed with dcz, mg, po4
        
        chain a [111894]
        chain b [111895]
      10. 2g1a
        automatically matched to d1n8na_
        complexed with 5hg, mg
        
        region a:4-212 [134514]
      11. 2g1a
        automatically matched to d1n8na_
        complexed with 5hg, mg
        
        region b:4-212 [134515]
      12. 2b8j
        automatically matched to d1n8na_
        complexed with adn, au, au3, mg, po4, spm
        
        region a:4-212 [128074]
      13. 2b8j
        automatically matched to d1n8na_
        complexed with adn, au, au3, mg, po4, spm
        
        region b:4-212 [128075]
      14. 1rmq
        complexed with co, os
        
        chain a [111886]
        chain b [111887]
      15. 1n9k
        complexed with br, mg
        
        chain a [91732]
        chain b [91733]
    2. Salmonella typhimurium [TaxId: 90371] [142153] (12)
      SQ P58683 30-237
      1. 1z5g
        complexed with mg, po4
        
        region a:7-214 [124476]
      2. 1z5g
        automatically matched to 1Z5G A:7-214
        complexed with mg, po4
        
        region b:7-214 [124477]
      3. 1z5g
        automatically matched to 1Z5G A:7-214
        complexed with mg, po4
        
        region c:7-214 [124478]
      4. 1z5g
        automatically matched to 1Z5G A:7-214
        complexed with mg, po4
        
        region d:7-214 [124479]
      5. 1z88
        complexed with mg; mutant
        
        region a:7-214 [124691]
      6. 1z88
        automatically matched to 1Z88 A:7-214
        complexed with mg; mutant
        
        region b:7-214 [124692]
      7. 1z88
        automatically matched to 1Z88 A:7-214
        complexed with mg; mutant
        
        region c:7-214 [124693]
      8. 1z88
        automatically matched to 1Z88 A:7-214
        complexed with mg; mutant
        
        region d:7-214 [124694]
      9. 1z5u
        automatically matched to 1Z5G A:7-214
        complexed with cmp, mg
        
        region a:7-214 [124493]
      10. 1z5u
        automatically matched to 1Z5G A:7-214
        complexed with cmp, mg
        
        region b:7-214 [124494]
      11. 1z5u
        automatically matched to 1Z5G A:7-214
        complexed with cmp, mg
        
        region c:7-214 [124495]
      12. 1z5u
        automatically matched to 1Z5G A:7-214
        complexed with cmp, mg
        
        region d:7-214 [124496]
10. Hypothetical protein MW1667 (SA1546) [102310] (1)
  the insertion subdomain is multi-helical
  1. Hypothetical protein MW1667 (SA1546) [102311]
    1. Staphylococcus aureus [TaxId: 1280] [102312] (1)
      1. 1qyi
        structural genomics; NESG target ZR25
        
        chain a [96595]
11. phosphatase domain of polynucleotide kinase [82385] (2)
  no insertion subdomains
  1. Polynucleotide kinase, phosphatase domain [82386]
    1. Bacteriophage T4 [TaxId: 10665] [82387] (16)
      1. 1ltq
        complexed with adp, dms, mse
        
        region a:153-301 [78208]
      2. 1rrc
        complexed with adp, ca, dms
        
        region a:153-301 [97789]
      3. 1rc8
        complexed with adp, ca, dms
        
        region a:153-301 [97291]
      4. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region a:153-301 [137133]
      5. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region b:153-301 [137135]
      6. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region c:153-301 [137137]
      7. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region d:153-301 [137139]
      8. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region e:153-301 [137141]
      9. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region f:153-301 [137143]
      10. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region g:153-301 [137145]
      11. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region h:153-301 [137147]
      12. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region i:153-301 [137149]
      13. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region j:153-301 [137151]
      14. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region k:153-301 [137153]
      15. 2ia5
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        
        region l:153-301 [137155]
      16. 1rpz
        complexed with adp, ca, dms
        
        region a:153-301 [97720]
  2. 5' polynucleotide kinase-3' phosphatase, middle domain [142154]
    1. Mouse (Mus musculus) [TaxId: 10090] [142155] (2)
      SQ Q9JLV6 144-338
      1. 1yj5
        complexed with so4
        
        region a:144-338 [123380]
      2. 1yj5
        automatically matched to 1YJ5 A:144-338
        complexed with so4
        
        region b:144-338 [123382]
12. Predicted hydrolases Cof [82388] (13)
  contains an alpha+beta subdomain inserted into a new site after strand 3
  1. Phosphoglycolate phosphatase, PGPase [82389]
    1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [82390] (2)
      1. 1l6r
        structural genomics
        complexed with ca, fmt
        
        chain a [77768]
        chain b [77769]
      2. 1kyt
        structural genomics; MCSG target APC014
        complexed with ca, mse; mutant
        
        chain a [77631]
        chain b [77632]
    2. Pyrococcus horikoshii [TaxId: 53953] [117502] (1)
      SQ O50129 # PH1421
      1. 1wr8
        Structural genomics target
        complexed with act
        
        chain a [114836]
        chain b [114837]
  2. Hypothetical protein YwpJ [89646]
    1. Bacillus subtilis [TaxId: 1423] [89647] (1)
      1. 1nrw
        structural genomics
        complexed with ca, mse, po4
        
        chain a [86128]
  3. Hypothetical protein TM0651 [102313]
    1. Thermotoga maritima [TaxId: 2336] [102314] (1)
      1. 1nf2
        structural genomics
        complexed with mg, so4
        
        chain a [91849]
        chain b [91850]
        chain c [91851]
  4. Hypothetical protein YidA [102315]
    1. Escherichia coli [TaxId: 562] [102316] (1)
      1. 1rkq
        structural genomics; NYSGRC target T1436
        complexed with cl, mo3
        
        chain a [97621]
        chain b [97622]
  5. Sugar phosphatase SupH (YbiV) [117503]
    1. Escherichia coli [TaxId: 562] [117504] (3)
      SQ P75792
      1. 1rlm
        complexed with gol, mg; mutant
        
        chain a [111860]
        chain b [111861]
        chain c [111862]
        chain d [111863]
      2. 1rlo
        complexed with bfd, gol, mg; mutant
        
        chain a [111864]
        chain b [111865]
        chain c [111866]
        chain d [111867]
      3. 1rlt
        complexed with act, af3, gol, mg; mutant
        
        chain a [111868]
        chain b [111869]
        chain c [111870]
        chain d [111871]
  6. Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) [117505]
    1. Escherichia coli [TaxId: 562] [117506] (1)
      SQ P76329 4-235
      1. 1xvi
        Structural genomics target
        complexed with 1pe, pg4, pge, so4
        
        chain a [116088]
        chain b [116089]
    2. Archaeon Pyrococcus horikoshii [TaxId: 53953] [142156] (2)
      SQ O58690 1-243
      1. 1wzc
        complexed with mg, po4; mutant
        
        region a:1-243 [121491]
      2. 1wzc
        automatically matched to 1WZC A:1-243
        complexed with mg, po4; mutant
        
        region b:1-243 [121492]
  7. Sugar-phosphate phosphatase BT4131 [142157]
    1. Bacteroides thetaiotaomicron [TaxId: 818] [142158] (3)
      SQ Q8A090 2-261
      1. 2rbk
        automatically matched to d1ymqa1
        complexed with mg, vn4
        
        region a:2-261 [151850]
      2. 2rb5
        automatically matched to d1ymqa1
        complexed with mg, wo6
        
        region a:2-261 [151843]
      3. 1ymq
        complexed with mg, so4
        
        region a:2-261 [123707]
  8. Phosphomannomutase 2 [142159]
    1. Human (Homo sapiens) [TaxId: 9606] [142160] (2)
      SQ O15305 4-246
      1. 2amy
        complexed with edo, gly
        
        region a:4-246 [127026]
      2. 2q4r
        automatically matched to 2AMY A:4-246
        complexed with edo, gly
        
        region a:4-246 [139876]
  9. Phosphomannomutase 1 [142161]
    1. Human (Homo sapiens) [TaxId: 9606] [142162] (2)
      SQ Q92871 12-256
      1. 2fue
        automatically matched to 2FUC A:12-256
        complexed with m1p, mg
        
        region a:13-256 [134119]
      2. 2fuc
        complexed with mg
        
        region a:12-256 [134116]
  10. Sucrose-phosphatase Slr0953 [142163]
    1. Synechocystis sp. pcc 6803 [TaxId: 1148] [142164] (9)
      SQ P74325 1-244
      1. 1s2o
        complexed with mg
        
        region a:1-244 [118846]
      2. 2b1q
        automatically matched to 1S2O A:1-244
        complexed with mg, tre
        
        region a:1-244 [127673]
      3. 2b1r
        automatically matched to 1S2O A:1-244
        complexed with cbi, mg
        
        region a:1-244 [127674]
      4. 1tj5
        automatically matched to 1S2O A:1-244
        complexed with mg, po4, suc
        
        region a:1-244 [119285]
      5. 1u2s
        automatically matched to 1S2O A:1-244
        complexed with glc, mg
        
        region a:1-244 [119485]
      6. 2d2v
        automatically matched to 1S2O A:1-244
        complexed with mal, mg
        
        region a:1-244 [131189]
      7. 1tj4
        automatically matched to 1S2O A:1-244
        complexed with mg, suc
        
        region a:1-244 [119284]
      8. 1tj3
        automatically matched to 1S2O A:1-244
        complexed with mg
        
        region a:1-244 [119283]
      9. 1u2t
        automatically matched to 1S2O A:1-244
        complexed with sup
        
        region a:1-244 [119486]
  11. PFL1270w orthologue [142165]
    1. Plasmodium vivax [TaxId: 5855] [142166] (4)
      SQ Q8I5F4 11-293
      1. 2b30
        complexed with ca, cl
        
        region a:18-300 [127759]
      2. 2b30
        automatically matched to 2B30 A:18-300
        complexed with ca, cl
        
        region b:18-300 [127760]
      3. 2b30
        automatically matched to 2B30 A:18-300
        complexed with ca, cl
        
        region c:18-300 [127761]
      4. 2b30
        automatically matched to 2B30 A:18-300
        complexed with ca, cl
        
        region d:18-300 [127762]
13. NagD-like [102317] (6)
  duplication: consists of two segment-swapped domains of this fold; this results in the insertion of a circularly permuted domain after strand 3, analogously to the Cof family
  1. Hypothetical protein TM1742 [102318]
    putative NagD protein
    1. Thermotoga maritima [TaxId: 2336] [102319] (2)
      1. 1vjr
        structural genomics
        complexed with cl, ni
        
        chain a [100832]
      2. 1pw5
        structural genomics,
        complexed with nag, so4
        
        chain a [95199]
  2. Putative phosphatase SMU.1415c [117507]
    1. Streptococcus mutans [TaxId: 1309] [117508] (1)
      SQ Q8DTD6
      1. 1wvi
        Structural genomics target
        
        chain a [114915]
        chain b [114916]
        chain c [114917]
        chain d [114918]
  3. Hypothetical protein SPy1043 [142167]
    1. Streptococcus pyogenes [TaxId: 1314] [142168] (1)
      SQ Q99ZW4 2-254
      1. 1ys9
        mutant
        
        region a:2-254 [123965]
  4. NagD [142169]
    1. Escherichia coli [TaxId: 562] [142170] (1)
      SQ P0AF24 1-250
      1. 2c4n
        complexed with mg, po4
        
        region a:1-250 [129837]
  5. Putative hydrolase SP1407 [142171]
    1. Streptococcus pneumoniae [TaxId: 1313] [142172] (1)
      SQ Q97Q24 3-255
      1. 1ydf
        complexed with mg
        
        region a:4-256 [122996]
  6. Putative hydrolase EF1188 [142173]
    1. Enterococcus faecalis [TaxId: 1351] [142174] (2)
      SQ Q836C7 4-256
      1. 1yv9
        complexed with po4
        
        region a:4-256 [124089]
      2. 1yv9
        automatically matched to 1YV9 A:4-256
        complexed with po4
        
        region b:4-256 [124090]
14. Meta-cation ATPase, catalytic domain P [81656] (2)
  interrupted by a large insertion, domain N
  1. Calcium ATPase, catalytic domain P [81655]
    1. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [81654] (17)
      SQ P04191
      1. 1wpg
        complexed with adp, mf4, mg, na, tg1
        
        region a:344-360,a:600-750 [114807]
        region b:344-360,b:600-750 [114811]
        region c:344-360,c:600-750 [114815]
        region d:344-360,d:600-750 [114819]
      2. 2zbf
        automatically matched to d1iwoa2
        complexed with ace, bef, mg, tg1
        
        region a:344-360,a:600-750 [154314]
      3. 2zbd
        automatically matched to d1iwoa2
        complexed with ace, adp, alf, ca, mg, pc1
        
        region a:344-360,a:600-750 [154302]
      4. 2zbg
        automatically matched to d1iwoa2
        complexed with ace, alf, mg, tg1
        
        region a:344-360,a:600-750 [154318]
      5. 1su4
        complexed with ca, na
        
        region a:344-360,a:600-750 [98994]
      6. 1t5s
        complexed with acp, ca, k, mg
        
        region a:344-360,a:600-750 [106474]
      7. 3b9b
        automatically matched to d1iwoa2
        complexed with bef, mg, na
        
        region a:344-360,a:600-750 [154995]
      8. 1vfp
        complexed with acp, ca, mg
        
        region a:344-360,a:600-750 [108577]
        region b:344-360,b:600-750 [108581]
      9. 1t5t
        complexed with adp, alf, ca, k, mg
        
        region a:344-360,a:600-750 [106478]
      10. 3b9r
        automatically matched to d1iwoa2
        complexed with acp, alf, k, mg
        
        region a:344-360,a:600-750 [155015]
      11. 3b9r
        automatically matched to d1iwoa2
        complexed with acp, alf, k, mg
        
        region b:344-360,b:600-750 [155019]
      12. 1xp5
        complexed with alf, k, mg, tg1
        
        region a:344-360,a:600-750 [115731]
      13. 1wpe
        complexed with adp, af3, ca, mg
        
        region a:344-360,a:600-750 [114803]
      14. 1iwo
        Structure in the absence of calcium ions
        complexed with tg1
        
        region a:344-360,a:600-750 [75855]
        region b:344-360,b:600-750 [75859]
      15. 2zbe
        automatically matched to d1iwoa2
        complexed with ace, bef, mg
        
        region a:344-360,a:600-750 [154306]
      16. 2zbe
        automatically matched to d1iwoa2
        complexed with ace, bef, mg
        
        region b:344-360,b:600-750 [154310]
      17. 1kju
        Structure in the e2 state
        
        region a:344-360,a:600-750 [75893]
  2. Cation-transporting ATPase [142175]
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [142176] (3)
      SQ O29777 416-434,548-663
      1. 2b8e
        
        region a:416-434,a:548-663 [128068]
      2. 2b8e
        automatically matched to 2B8E A:416-434,A:548-663
        
        region b:416-434,b:548-663 [128070]
      3. 2b8e
        automatically matched to 2B8E A:416-434,A:548-663
        
        region c:416-434,c:548-663 [128072]
15. Trehalose-phosphatase [110506] (1)
  Pfam 02358; contains an insert alpha+beta subdomain; similar overall fold to the Cof family
  1. Trehalose-6-phosphate phosphatase related protein [110507]
    1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [110508] (1)
      SQ Q9HIW7
      1. 1u02
        Structural genomics target
        complexed with gol, mg, na
        
        chain a [107538]
16. NLI interacting factor-like phosphatase [110509] (1)
  Pfam 03031; NIF; the insertion subdomain is a 3-stranded beta-sheet;
  1. Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 [110510]
    1. Human (Homo sapiens) [TaxId: 9606] [110511] (2)
      SQ Q9GZU7 76-256
      1. 1ta0
        complexed with bfd, cit, mg
        
        chain a [106729]
      2. 1t9z
        complexed with cit, mg; mutant
        
        chain a [106728]
17. Magnesium-dependent phosphatase-1, Mdp1 [117509] (1)
  the insertion subdomain is a 3-stranded beta-sheet different from the NIF family
  1. Magnesium-dependent phosphatase-1, Mdp1 [117510]
    1. Mouse (Mus musculus) [TaxId: 10090] [117511] (2)
      SQ Q9D967
      1. 1u7p
        complexed with mg, wo4
        
        chain a [113095]
        chain b [113096]
        chain c [113097]
        chain d [113098]
      2. 1u7o
        complexed with act
        
        chain a [113094]
18. Hypothetical protein VC0232 [117512] (1)
  contains a deletion in the common fold; segment-swapped tetramer
  1. Hypothetical protein VC0232 [117513]
    1. Vibrio cholerae [TaxId: 666] [117514] (1)
      SQ Q9KVB4
      1. 1xpj
        Structural genomics target
        complexed with hg, tar
        
        chain a [115739]
        chain b [115740]
        chain c [115741]
        chain d [115742]
19. Histidinol phosphatase-like [142177] (3)
  no insertion subdomains
  1. Histidine biosynthesis bifunctional protein HisB, phosphatase domain [142178]
    1. Escherichia coli [TaxId: 562] [142179] (10)
      SQ Q9S5G5 3-163
      1. 2fpw
        automatically matched to 2FPR A:3-163
        complexed with ca, phd, zn
        
        region a:3-163 [133927]
      2. 2fpw
        automatically matched to 2FPR A:3-163
        complexed with ca, phd, zn
        
        region b:4-163 [133928]
      3. 2fpr
        complexed with br, mg, na, zn
        
        region a:3-163 [133919]
      4. 2fpr
        automatically matched to 2FPR A:3-163
        complexed with br, mg, na, zn
        
        region b:4-163 [133920]
      5. 2fpx
        automatically matched to 2FPR A:3-163
        complexed with mg, so4, zn
        
        region a:3-163 [133929]
      6. 2fpx
        automatically matched to 2FPR A:3-163
        complexed with mg, so4, zn
        
        region b:4-163 [133930]
      7. 2fpu
        automatically matched to 2FPR A:3-163
        complexed with cl, hso, mg, zn
        
        region a:3-163 [133924]
      8. 2fpu
        automatically matched to 2FPR A:3-163
        complexed with cl, hso, mg, zn
        
        region b:4-163 [133925]
      9. 2fps
        automatically matched to 2FPR A:3-163
        complexed with ca, cl, zn
        
        region a:3-163 [133921]
      10. 2fps
        automatically matched to 2FPR A:3-163
        complexed with ca, cl, zn
        
        region b:4-163 [133922]
  2. Hypothetical protein Mll2559 [159532]
    1. Mesorhizobium loti [TaxId: 381] [159533] (1)
      SQ Q98I56 8-216
      1. 2o2x
        complexed with gol
        
        region a:8-216 [148564]
  3. D,D-heptose 1,7-bisphosphate phosphatase GmhB [159534]
    1. Escherichia coli [TaxId: 562] [159535] (4)
      SQ P63228 4-185
      1. 2gmw
        complexed with zn
        
        region a:24-205 [147137]
      2. 2gmw
        automatically matched to 2GMW A:24-205
        complexed with zn
        
        region b:24-205 [147138]
      3. 3esq
        automatically matched to 2GMW A:24-205
        complexed with ca, zn
        
        region a:24-205 [158196]
      4. 3esr
        automatically matched to 2GMW A:24-205
        complexed with ca, po4, zn
        
        region a:24-205 [158197]
20. MtnX-like [142180] (1)
  Pfam 06888; the insertion subdomain is a rudiment 4-helical bundle
  1. 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX [142181]
    1. Bacillus subtilis [TaxId: 1423] [142182] (2)
      SQ O31667 2-227
      1. 2fea
        complexed with edo, mg, zn
        
        region a:2-227 [133327]
      2. 2fea
        automatically matched to 2FEA A:2-227
        complexed with edo, mg, zn
        
        region b:3-226 [133328]
21. Pyrimidine 5'-nucleotidase (UMPH-1) [142183] (2)
  Pfam 05822; the insertion subdomain is a rudiment 4-helical bundle
  1. Cytosolic 5'-nucleotidase III [142184]
    1. Human (Homo sapiens) [TaxId: 9606] [142185] (2)
      SQ Q9H0P0 64-336
      1. 2vkq
        automatically matched to d2cn1a1
        complexed with bef, mg
        
        region a:14-286 [153228]
      2. 2cn1
        
        region a:14-286 [130633]
    2. Mouse (Mus musculus) [TaxId: 10090] [159536] (1)
      SQ Q9D020 7-297
      1. 2bdu
        complexed with epe
        
        region a:7-297 [146135]
22. Enolase-phosphatase E1 [142186] (2)
  the insertion subdomain is a 4-helical bundle
  1. Protein UTR4 [142187]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [142188] (4)
      SQ P32626 17-241
      1. 2g80
        complexed with gol, mg, pe4
        
        region a:17-241 [134741]
      2. 2g80
        automatically matched to 2G80 A:17-241
        complexed with gol, mg, pe4
        
        region b:18-241 [134742]
      3. 2g80
        automatically matched to 2G80 A:17-241
        complexed with gol, mg, pe4
        
        region c:18-241 [134743]
      4. 2g80
        automatically matched to 2G80 A:17-241
        complexed with gol, mg, pe4
        
        region d:18-241 [134744]
  2. E-1 enzyme [142189]
    1. Human(Homo sapiens) [TaxId: 9606] [142190] (2)
      SQ Q9UHY7 4-256
      1. 1zs9
        complexed with mg
        
        region a:4-256 [125600]
      2. 1yns
        automatically matched to 1ZS9 A:4-256
        complexed with hpo, mg
        
        region a:4-256 [123754]
23. 5' nucleotidase-like [142191] (1)
  Pfam 05761; the insertion domain cosists of 3-helical bundle and a pseudo beta-barrel; contains extra C-terminal long alpha hairpin subdomain (scop_cf 46556)
  1. Cytosolic IMP-GMP specific 5'-nucleotidase [142192]
    1. Legionella pneumophila [TaxId: 446] [142193] (1)
      SQ Q5ZZB6 2-459
      1. 2bde
        complexed with so4
        
        region a:2-459 [128335]
24. AF1437-like [159537] (1)
  the insertion subdomain is a rudiment 4-helical bundle; extra alpha-hairpin insertion after strand 3
  1. Hypothetical protein AF1437 [159538]
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [159539] (1)
      SQ O28835 1-308
      1. 1y8a
        complexed with mg
        
        region a:1-308 [145913]
25. BT0820-like [159540] (1)
  PfamB 073209; deletion in the common fold; segment-swapped dimer
  1. Hypothetical protein BT0820 [159541]
    1. Bacteroides thetaiotaomicron [TaxId: 818] [159542] (1)
      SQ Q8A9J5 1-122
      1. 2obb
        complexed with mg
        
        region a:1-122 [148715]