Structural Classification of Proteins
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Fold: PLP-dependent transferase-like

main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: PLP-dependent transferase-like [53382]
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

Superfamilies:

  1. PLP-dependent transferases [53383] (9)
    link to SUPERFAMILY database - Superfamily
    1. AAT-like [53384] (28) picpic
    2. Beta-eliminating lyases [53397] (4) picpic
    3. Pyridoxal-dependent decarboxylase [69565] (3) picpic
    4. Cystathionine synthase-like [53402] (24) picpic
    5. GABA-aminotransferase-like [53417] (27) picpic
      formerly omega-Aminoacid:pyruvate aminotransferase-like
    6. Ornithine decarboxylase major domain [53444] (1) picpic
    7. Glycine dehydrogenase subunits (GDC-P) [142678] (2) picpic
      Pfam 02347
    8. SelA-like [142683] (1) picpic
      Pfam 03841
    9. SepSecS-like [159704] (3) picpic
      Pfam 05889
  2. PhnH-like [159709] (1)
    single domain protein of similar topology to the core domain of PLP-transferases
    1. PhnH-like [159710] (1) picpic
      Pfam 05845; Bacterial phosphonate metabolism protein (PhnH)
  3. Dhaf3308-like [159713] (1)
    not known to bind PLP cofactor; the extra N-terminal subdomain has a enolase N-terminal domain-like fold (scop_cf 54825)
    1. Dhaf3308-like [159714] (1) picpic
      Pfam 04016; DUF364
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk