Structural Classification of Proteins
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Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: FwdE/GAPDH domain-like [55346]
    core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1
  4. Superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347]
    N-terminal domain is the classic Rossmann-fold
    link to SUPERFAMILY database - Superfamily
  5. Family: GAPDH-like [55348]
    has many additional secondary structures
  6. Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [55349]
  7. Species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422] [55351]

PDB Entry Domains:

  1. 3cmc picpicxrefxrefxrefxref
    automatically matched to d1gd1o2
    complexed with edo, g3h, gol, nad, so4
    1. region o:149-312 [156801] picpiclink
  2. 3cmc picpicxrefxrefxrefxref
    automatically matched to d1gd1o2
    complexed with edo, g3h, gol, nad, so4
    1. region p:149-312 [156803] picpiclink
  3. 3cmc picpicxrefxrefxrefxref
    automatically matched to d1gd1o2
    complexed with edo, g3h, gol, nad, so4
    1. region q:149-312 [156805] picpiclink
  4. 3cmc picpicxrefxrefxrefxref
    automatically matched to d1gd1o2
    complexed with edo, g3h, gol, nad, so4
    1. region r:149-312 [156807] picpiclink
  5. 1gd1 picpicxref
    complexed with nad, so4
    1. region o:149-312 [39877] picpiclink
    2. region p:149-312 [39878] picpiclink
    3. region q:149-312 [39879] picpiclink
    4. region r:149-312 [39880] picpiclink
  6. 1nqo picpicxref
    complexed with g3h, nad; mutant
    1. region a:149-312 [86045] picpiclink
    2. region c:149-312 [86047] picpiclink
    3. region o:149-312 [86049] picpiclink
    4. region q:149-312 [86051] picpiclink
  7. 1npt picpicxref
    complexed with nad, so4; mutant
    1. region o:149-312 [85988] picpiclink
    2. region p:149-312 [85990] picpiclink
    3. region q:149-312 [85992] picpiclink
    4. region r:149-312 [85994] picpiclink
  8. 1nq5 picpicxref
    complexed with nad, so4; mutant
    1. region a:149-312 [86009] picpiclink
    2. region c:149-312 [86011] picpiclink
    3. region o:149-312 [86013] picpiclink
    4. region q:149-312 [86015] picpiclink
  9. 1nqa picpicxref
    complexed with g3h, nad; mutant
    1. region o:149-312 [86017] picpiclink
    2. region p:149-312 [86019] picpiclink
    3. region q:149-312 [86021] picpiclink
    4. region r:149-312 [86023] picpiclink
  10. 1dbv picpicxref
    complexed with nad, so4; mutant
    1. region o:149-312 [39881] picpiclink
    2. region p:149-312 [39882] picpiclink
    3. region q:149-312 [39883] picpiclink
    4. region r:149-312 [39884] picpiclink
  11. 4dbv picpicxref
    complexed with ndp, so4; mutant
    1. region o:149-312 [39889] picpiclink
    2. region p:149-312 [39890] picpiclink
    3. region q:149-312 [39891] picpiclink
    4. region r:149-312 [39892] picpiclink
  12. 2dbv picpicxref
    complexed with ndp, so4; mutant
    1. region o:149-312 [39885] picpiclink
    2. region p:149-312 [39886] picpiclink
    3. region q:149-312 [39887] picpiclink
    4. region r:149-312 [39888] picpiclink
  13. 2gd1 picpicxref
    complexed with so4
    1. region o:149-312 [39893] picpiclink
    2. region p:149-312 [39894] picpiclink
    3. region q:149-312 [39895] picpiclink
    4. region r:149-312 [39896] picpiclink
  14. 3dbv picpicxref
    complexed with nad, so4; mutant
    1. region o:149-312 [39897] picpiclink
    2. region p:149-312 [39898] picpiclink
    3. region q:149-312 [39899] picpiclink
    4. region r:149-312 [39900] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk