Structural Classification of Proteins
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Protein: Diaminopimelic acid dehydrogenase (DAPDH) from Corynebacterium glutamicum [TaxId: 1718]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: FwdE/GAPDH domain-like [55346]
    core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1
  4. Superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347]
    N-terminal domain is the classic Rossmann-fold
    link to SUPERFAMILY database - Superfamily
  5. Family: Dihydrodipicolinate reductase-like [55368]
  6. Protein: Diaminopimelic acid dehydrogenase (DAPDH) [55369]
    distantly related to dihydrodipicolinate reductase
    larger alpha+beta subdomain substitutes for one helix and one strand of the common fold
  7. Species: Corynebacterium glutamicum [TaxId: 1718] [55370]

PDB Entry Domains:

  1. 1f06 picpicxref
    complexed with 2np, ndp
    1. region a:119-268 [59557] picpiclink
    2. region b:619-768 [59559] picpiclink
  2. 3dap picpicxref
    complexed with da3, ndp
    1. region a:119-268 [39966] picpiclink
    2. region b:119-268 [39967] picpiclink
  3. 2dap picpicxref
    complexed with api
    1. region a:119-268 [39965] picpiclink
  4. 1dap picpicxref
    complexed with act, ndp
    1. region a:119-268 [39968] picpiclink
    2. region b:119-268 [39969] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk