Structural Classification of Proteins
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Family: TRAPP components

Pfam 04051; form homo- and hetero-dimers with the first two helices of one subunit complementing the fold of the other subunit to the H-NOX domain fold

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ligand-binding domain in the NO signalling and Golgi transport [111125]
    an N-terminal helical bundle and the C-terminal alpha-beta(2)-alpha-beta(2) subdomain enclose a ligand-binding cavity
  4. Superfamily: Ligand-binding domain in the NO signalling and Golgi transport [111126]
    link to SUPERFAMILY database - Superfamily
  5. Family: TRAPP components [118076]
    Pfam 04051; form homo- and hetero-dimers with the first two helices of one subunit complementing the fold of the other subunit to the H-NOX domain fold

Protein Domains:

  1. Trafficking protein particle complex subunit 3, Bet3 homolog [118077]
    covalently linked long fatty acid occupies the ligand-binding cavity
    1. Mouse (Mus musculus) [TaxId: 10090] [118078] (3) picpic
      SQ O55013 9-173
  2. TRAPPC5, similar to trafficking protein particle complex 5 [160687]
    1. Zebrafish (Brachydanio rerio) [TaxId: 7955] [160688] (2) picpic
      SQ Q6DGL5 21-188
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk