Structural Classification of Proteins
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Superfamily: PsbU/PolX domain-like

contains one classic and one pseudo HhH motifs
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SAM domain-like [47768]
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily: PsbU/PolX domain-like [81585]
    contains one classic and one pseudo HhH motifs
    link to SUPERFAMILY database - Superfamily

Families:

  1. DNA polymerase beta-like, second domain [81584] (4)
    topological similarity to the N-terminal domain
    1. DNA polymerase beta [81579]
      1. Human (Homo sapiens) [TaxId: 9606] [81575] (107) picpic
      2. Rat (Rattus norvegicus) [TaxId: 10116] [81577] (18) picpic
    2. Terminal deoxynucleotidyl transferase [81583]
      1. Mouse (Mus musculus) [TaxId: 10090] [81582] (3) picpic
    3. DNA polymerase lambda [101253]
      1. Human (Homo sapiens) [TaxId: 9606] [101254] (24) picpic
  2. PsbU-like [158539] (1)
    Pfam 06514
    1. Photosystem II 12 kDa extrinsic protein PsbU [158540]
      1. Thermosynechococcus elongatus [TaxId: 146786] [158541] (1) picpic
        SQ Q9F1L5 37-134
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk