Structural Classification of Proteins
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Protein: Immunoglobulin light chain lambda variable domain, VL-lambda from Mouse (Mus musculus) [TaxId: 10090]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: Immunoglobulin [48726]
    link to SUPERFAMILY database - Superfamily
  5. Family: V set domains (antibody variable domain-like) [48727]
  6. Protein: Immunoglobulin light chain lambda variable domain, VL-lambda [88534]
    VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family
  7. Species: Mouse (Mus musculus) [TaxId: 10090] [88541]

PDB Entry Domains:

  1. 1mfa picpicxref
    part of Fv SE155-4
    complexed with abe, gal, mma
    1. region l:1-111 [19888] picpiclink
  2. 1q0x picpicxrefxrefxref
    part of anti-morphine Fab 9b1
    complexed with pg4, so4
    1. region l:1-107 [95519] picpiclink
  3. 1a6w picpicxref
    part of Fv B1-8
    complexed with nip
    1. chain l [20252] picpiclink
  4. 1q0y picpicxrefxrefxref
    part of anti-morphine Fab 9b1
    complexed with moi, so4
    1. region l:1-107 [95523] picpiclink
  5. 1mfb picpicxrefxrefxref
    part of Fab SE155-4
    complexed with abe, gal, man, ram
    1. region l:1-111 [19890] picpiclink
  6. 1mfc picpicxrefxrefxref
    part of Fab SE155-4
    complexed with abe, gal, man, ram
    1. region l:1-111 [19894] picpiclink
  7. 1a6u picpicxref
    part of Fv B1-8
    1. chain l [20254] picpiclink
  8. 1mfe picpicxrefxrefxref
    part of Fab SE155-4
    complexed with abe, gal, man
    1. region l:1-111 [19892] picpiclink
  9. 1sm3 picpicxrefxrefxref
    part of tumor-specific Fab SM3 against epithelial mucin Muc1
    complexed with cd, cl
    1. region l:3-107 [20368] picpiclink
  10. 1mfd picpicxrefxrefxref
    part of Fab SE155-4
    complexed with abe, gal, mma
    1. region l:1-111 [19896] picpiclink
  11. 1nc2 picpicxrefxrefxref
    part of Fab 2d12.5
    complexed with cl, doe, nag, yt3
    1. region a:1-110 [91781] picpiclink
    2. region c:1-110 [91785] picpiclink
  12. 1nc4 picpicxrefxrefxref
    part of Fab 2d12.5
    complexed with cl, dof, gd3, nag
    1. region a:1-110 [91789] picpiclink
    2. region c:1-110 [91793] picpiclink
  13. 1f4x picpicxrefxrefxref
    part of anti-carbohydrate Fab S-20-4
    complexed with mgs
    1. region l:1-110 [20450] picpiclink
  14. 1f4w picpicxrefxrefxref
    part of anti-carbohydrate Fab S-20-4
    1. region l:1-110 [20452] picpiclink
  15. 1p4b picpicxref
    part of anti-GCN4 peptide scFv
    1. chain l [94099] picpiclink
  16. 1gig picpicxrefxrefxref
    part of Fab HC19
    1. region l:1-110 [19910] picpiclink
  17. 1pg7 picpicxrefxrefxrefxrefxrefxrefxref
    part of Fab 6A6
    1. region w:1-108 [94682] picpiclink
    2. region y:1-108 [94686] picpiclink
  18. 1ind picpicxrefxrefxref
    part of Fab Cha255
    complexed with eot, in
    1. region l:2-109 [19838] picpiclink
  19. 1a6v picpicxref
    part of Fv B1-8
    complexed with npc
    1. chain l [20256] picpiclink
    2. chain m [20258] picpiclink
    3. chain n [20260] picpiclink
  20. 1ngp picpicxrefxrefxref
    part of Fab N1G9
    complexed with npa, so4
    1. region l:1-109 [20090] picpiclink
  21. 1etz picpicxrefxrefxref
    part of anti-sweetener Fab NC10.14
    complexed with gas
    1. region l:1-110 [20478] picpiclink
    2. region a:1-110 [20480] picpiclink
  22. 1ngq picpicxrefxrefxref
    part of Fab N1G9
    complexed with so4
    1. region l:1-109 [20092] picpiclink
  23. 1nj9 picpicxrefxrefxref
    part of cocaine hydrolytic Fab 15a10
    complexed with na
    1. region a:1-108 [91897] picpiclink
    2. region l:1-108 [91903] picpiclink
  24. 1jnh picpicxrefxrefxref
    part of anti-estradiol Fab 10G6D6
    complexed with eco
    1. region a:1-108 [66939] picpiclink
    2. region c:1-108 [66943] picpiclink
    3. region e:1-108 [66947] picpiclink
    4. region g:1-108 [66951] picpiclink
  25. 1p4i picpicxref
    part of anti-GCN4 peptide scFv
    mutant
    1. chain l [94105] picpiclink
  26. 1dl7 picpicxref
    part of Fv M3C65; conflict: annotated in PDB as human protein
    complexed with nch
    1. chain l [20498] picpiclink
  27. 1ine picpicxrefxrefxref
    part of Fab Cha255
    complexed with eot, fe
    1. region l:2-109 [19840] picpiclink
  28. 1jn6 picpicxrefxrefxref
    part of anti-estradiol Fab 10G6D6
    1. region a:1-108 [66923] picpiclink
  29. 2vit picpicxrefxrefxrefxref
    part of Fab HC19
    complexed with zn; mutant
    1. region a:1-110 [19914] picpiclink
  30. 2vis picpicxrefxrefxrefxref
    part of Fab HC19
    complexed with nag, zn; mutant
    1. region a:1-110 [19912] picpiclink
  31. 2vir picpicxrefxrefxrefxref
    part of Fab HC19
    complexed with zn
    1. region a:1-110 [19916] picpiclink
  32. 1f4y picpicxrefxrefxref
    part of anti-carbohydrate Fab S-20-4
    complexed with mgu
    1. region l:1-110 [20454] picpiclink
  33. 1yuh picpicxrefxrefxref
    part of an anti-nitrophenol Fab
    complexed with np
    1. region l:2-109 [20096] picpiclink
    2. region a:2-109 [20098] picpiclink
  34. 3c6l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1lila1
    complexed with ca
    1. region a:7-109 [155977] picpiclink
  35. 3c6l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1lila1
    complexed with ca
    1. region e:7-109 [155983] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk