Structural Classification of Proteins
home mail help root up expand collapse

Protein: Comovirus coat proteins (VP37 and VP23) from CPMV (Cowpea mosaic virus) [TaxId: 12264]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: Positive stranded ssRNA viruses [88633]
    link to SUPERFAMILY database - Superfamily
  5. Family: Comoviridae-like VP [88636]
    duplication: mature coat protein consists of three similar domains that can be in a single chain or in two separate chains
  6. Protein: Comovirus coat proteins (VP37 and VP23) [49627]
    chain 1 is one-domain VP23; chain 2 is two-domain VP37
  7. Species: CPMV (Cowpea mosaic virus) [TaxId: 12264] [89227]

PDB Entry Domains:

  1. 1ny7 picpic
    1. region 2:1-182 [86399] picpiclink
    2. region 2:183-369 [86400] picpiclink
    3. region 1:1-189 [86398] picpiclink
  2. 2bfu picpic
    automatically matched to d1ny721
    1. region l:1-182 [128453] picpiclink
  3. 2bfu picpic
    automatically matched to d1ny722
    1. region l:183-369 [128454] picpiclink
  4. 2bfu picpic
    automatically matched to d1ny711
    1. region s:1-189 [128455] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk