Structural Classification of Proteins
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Protein: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD from Escherichia coli [TaxId: 562]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: MurCD N-terminal domain [51983]
    3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; incomplete Rossmann-like fold; binds UDP group
  4. Superfamily: MurCD N-terminal domain [51984]
    link to SUPERFAMILY database - Superfamily
  5. Family: MurCD N-terminal domain [51985]
  6. Protein: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD [51986]
  7. Species: Escherichia coli [TaxId: 562] [51987]

PDB Entry Domains:

  1. 2jfg picpicxrefxref
    automatically matched to d1e0da1
    complexed with adp, so4, uma
    1. region a:1-93 [138306] picpiclink
  2. 2uag picpicxrefxref
    complexed with adp, mg, uma
    1. region a:1-93 [30650] picpiclink
  3. 4uag picpicxrefxref
    complexed with so4, uag, unx
    1. region a:1-93 [30651] picpiclink
  4. 3uag picpicxrefxref
    complexed with adp, epe, mn, uma
    1. region a:1-93 [30652] picpiclink
  5. 2jff picpicxrefxref
    automatically matched to d1e0da1
    complexed with lk2, so4
    1. region a:1-93 [138303] picpiclink
  6. 2uup picpicxrefxref
    automatically matched to d1e0da1
    complexed with lk4, so4
    1. region a:1-93 [152200] picpiclink
  7. 1uag picpicxrefxref
    complexed with so4, uma
    1. region a:1-93 [30653] picpiclink
  8. 1eeh picpicxrefxref
    complexed with uma
    1. region a:1-93 [30654] picpiclink
  9. 2jfh picpicxrefxref
    automatically matched to d1e0da1
    complexed with lk1, so4
    1. region a:1-93 [138309] picpiclink
  10. 2uuo picpicxrefxref
    automatically matched to d1e0da1
    complexed with lk3, so4
    1. region a:1-93 [152197] picpiclink
  11. 1e0d picpicxrefxref
    complexed with so4
    1. region a:1-93 [30655] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk