Structural Classification of Proteins
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Family: MurCDEF C-terminal domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: MurD-like peptide ligases, peptide-binding domain [53243]
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the rest
  4. Superfamily: MurD-like peptide ligases, peptide-binding domain [53244]
    link to SUPERFAMILY database - Superfamily
  5. Family: MurCDEF C-terminal domain [53245]

Protein Domains:

  1. UDP-N-acetylmuramate-alanine ligase MurC [82452]
    1. Thermotoga maritima [TaxId: 2336] [82453] (1)
      TM0231
      1. 1j6u picpicxrefxref
        structural genomics
        complexed with mse
        1. region a:296-446 [77095] picpiclink
    2. Haemophilus influenzae [TaxId: 727] [89727] (4)
      1. 1p3d picpicxrefxref
        complexed with anp, mn, mse, uma
        1. region a:322-473 [87729] picpiclink
        2. region b:322-473 [87732] picpiclink
      2. 1p31 picpicxrefxref
        complexed with epu, mg, mse
        1. region a:322-474 [87723] picpiclink
        2. region b:322-473 [87726] picpiclink
      3. 1gqy picpicxrefxref
        complexed with acp, mg
        1. region a:322-475 [83306] picpiclink
        2. region b:322-474 [83309] picpiclink
      4. 1gqq picpicxrefxref
        1. region a:322-475 [83300] picpiclink
        2. region b:322-475 [83303] picpiclink
  2. UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD [53246]
    1. Escherichia coli [TaxId: 562] [53247] (11)
      1. 2jfg picpicxrefxref
        automatically matched to d1e0da2
        complexed with adp, so4, uma
        1. region a:298-437 [138307] picpiclink
      2. 2uag picpicxrefxref
        complexed with adp, mg, uma
        1. region a:298-437 [33951] picpiclink
      3. 4uag picpicxrefxref
        complexed with so4, uag, unx
        1. region a:298-437 [33952] picpiclink
      4. 3uag picpicxrefxref
        complexed with adp, epe, mn, uma
        1. region a:298-437 [33953] picpiclink
      5. 2jff picpicxrefxref
        automatically matched to d1e0da2
        complexed with lk2, so4
        1. region a:298-437 [138304] picpiclink
      6. 2uup picpicxrefxref
        automatically matched to d1e0da2
        complexed with lk4, so4
        1. region a:298-437 [152201] picpiclink
      7. 1uag picpicxrefxref
        complexed with so4, uma
        1. region a:298-437 [33954] picpiclink
      8. 1eeh picpicxrefxref
        complexed with uma
        1. region a:298-437 [33955] picpiclink
      9. 2jfh picpicxrefxref
        automatically matched to d1e0da2
        complexed with lk1, so4
        1. region a:298-437 [138310] picpiclink
      10. 2uuo picpicxrefxref
        automatically matched to d1e0da2
        complexed with lk3, so4
        1. region a:298-437 [152198] picpiclink
      11. 1e0d picpicxrefxref
        complexed with so4
        1. region a:298-437 [33956] picpiclink
  3. UDP-N-acetylmuramyl tripeptide synthetase MurE [64107]
    1. Escherichia coli [TaxId: 562] [64108] (1)
      1. 1e8c picpicxrefxref
        complexed with api, cl, uag
        1. region a:338-497 [59378] picpiclink
        2. region b:338-498 [59381] picpiclink
  4. UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF [53248]
    1. Escherichia coli [TaxId: 562] [53249] (1)
      1. 1gg4 picpicxrefxref
        1. region a:313-447 [33957] picpiclink
        2. region b:813-947 [33958] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk