Structural Classification of Proteins
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Family: Ubiquitin-related

Pfam 00240

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: beta-Grasp (ubiquitin-like) [54235]
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. Superfamily: Ubiquitin-like [54236]
    link to SUPERFAMILY database - Superfamily
  5. Family: Ubiquitin-related [54237]
    Pfam 00240

Protein Domains:

  1. Ubiquitin [54238]
    1. Human (Homo sapiens) [TaxId: 9606] [54239] (102)
      SQ P62988
      identical sequence in many other species
      1. 1xd3 picpicxref
        complexed with gve, mg
        1. chain b [115146] picpiclink
        2. chain d [115148] picpiclink
      2. 1ogw picpic
        synthetic protein with fluoro-Leu at 50 and 67
        complexed with lef
        1. chain a [87001] picpiclink
      3. 2zcc picpic
        automatically matched to d1aara_
        complexed with zn
        1. region a:1-70 [154337] picpiclink
      4. 2zcc picpic
        automatically matched to d1aara_
        complexed with zn
        1. region b:1-70 [154338] picpiclink
      5. 2zcc picpic
        automatically matched to d1aara_
        complexed with zn
        1. region c:1-71 [154339] picpiclink
      6. 3by4 picpic
        automatically matched to d1aara_
        complexed with 3cn
        1. region b:1-73 [155720] picpiclink
      7. 2znv picpic
        automatically matched to d1aara_
        complexed with edo, zn; mutant
        1. region c:1-73 [154708] picpiclink
      8. 2znv picpic
        automatically matched to d1aara_
        complexed with edo, zn; mutant
        1. region f:1-70 [154710] picpiclink
      9. 2znv picpic
        automatically matched to d1gjza_
        complexed with edo, zn; mutant
        1. region b:1-51 [154707] picpiclink
      10. 2znv picpic
        automatically matched to d1gjza_
        complexed with edo, zn; mutant
        1. region e:1-51 [154709] picpiclink
      11. 2d3g picpic
        automatically matched to d1aara_
        1. region a:1-72 [131206] picpiclink
      12. 2d3g picpic
        automatically matched to d1aara_
        1. region b:1-72 [131207] picpiclink
      13. 2j7q picpicxrefxref
        automatically matched to d1aara_
        complexed with gol, gve, mg, pg4
        1. region b:1-75 [138127] picpiclink
      14. 2j7q picpicxrefxref
        automatically matched to d1aara_
        complexed with gol, gve, mg, pg4
        1. region d:1-75 [138128] picpiclink
      15. 1wrd picpicxref
        automatically matched to d1aara_
        1. region b:1-76 [121194] picpiclink
      16. 2oob picpic
        automatically matched to d1aara_
        1. region b:1-72 [139167] picpiclink
      17. 1ubi picpic
        1. chain a [37584] picpiclink
      18. 1ubq picpic
        1. chain a [37585] picpiclink
      19. 2hd5 picpicxref
        automatically matched to d1aara_
        complexed with zn
        1. region b:1-76 [136341] picpiclink
      20. 1uzx picpicxref
        annotated as bovine in PDB, identical to human sequence
        complexed with mes, mso, so4
        1. chain b [100239] picpiclink
      21. 2qho picpic
        automatically matched to d1aara_
        1. region a:1-72 [150790] picpiclink
      22. 2qho picpic
        automatically matched to d1aara_
        1. region c:1-73 [150791] picpiclink
      23. 2qho picpic
        automatically matched to d1aara_
        1. region e:1-73 [150792] picpiclink
      24. 2qho picpic
        automatically matched to d1aara_
        1. region g:1-72 [150793] picpiclink
      25. 2g45 picpicxrefxref
        automatically matched to d1aara_
        complexed with cl, zn
        1. region b:1-76 [134578] picpiclink
      26. 2g45 picpicxrefxref
        automatically matched to d1aara_
        complexed with cl, zn
        1. region e:1-76 [134579] picpiclink
      27. 1s1q picpicxref
        complexed with acy, cu, so4
        1. chain b [98352] picpiclink
        2. chain d [98354] picpiclink
      28. 2jf5 picpic
        automatically matched to d1aara_
        complexed with cd, cl, co, mg
        1. region a:1-73 [148030] picpiclink
      29. 2jf5 picpic
        automatically matched to d1aara_
        complexed with cd, cl, co, mg
        1. region b:1-73 [148031] picpiclink
      30. 2c7n picpicxrefxrefxrefxref
        automatically matched to d1aara_
        complexed with zn
        1. region b:1-74 [130070] picpiclink
      31. 2c7n picpicxrefxrefxrefxref
        automatically matched to d1aara_
        complexed with zn
        1. region d:1-74 [130072] picpiclink
      32. 2c7n picpicxrefxrefxrefxref
        automatically matched to d1aara_
        complexed with zn
        1. region f:1-74 [130073] picpiclink
      33. 2c7n picpicxrefxrefxrefxref
        automatically matched to d1aara_
        complexed with zn
        1. region h:1-73 [130075] picpiclink
      34. 2c7n picpicxrefxrefxrefxref
        automatically matched to d1aara_
        complexed with zn
        1. region j:1-72 [130077] picpiclink
      35. 2c7n picpicxrefxrefxrefxref
        automatically matched to d1aara_
        complexed with zn
        1. region l:1-74 [130078] picpiclink
      36. 2c7m picpicxref
        automatically matched to d1aara_
        complexed with zn
        1. region b:1-74 [130068] picpiclink
      37. 2ibi picpicxref
        automatically matched to d1aara_
        complexed with neh, zn; mutant
        1. region b:1-75 [137194] picpiclink
      38. 3c0r picpic
        automatically matched to d1aara_
        complexed with 3cn
        1. region b:1-73 [155839] picpiclink
      39. 3c0r picpic
        automatically matched to d1aara_
        complexed with 3cn
        1. region d:1-73 [155840] picpiclink
      40. 2o6v picpic
        automatically matched to d1gjza_
        complexed with mes, slz, so4; mutant
        1. region b:101-151 [138923] picpiclink
      41. 2o6v picpic
        automatically matched to d1aara_
        complexed with mes, slz, so4; mutant
        1. region a:1-75 [138922] picpiclink
      42. 2o6v picpic
        automatically matched to d1aara_
        complexed with mes, slz, so4; mutant
        1. region c:201-276 [138924] picpiclink
      43. 2o6v picpic
        automatically matched to d1aara_
        complexed with mes, slz, so4; mutant
        1. region e:401-475 [138925] picpiclink
      44. 2o6v picpic
        automatically matched to d1aara_
        complexed with mes, slz, so4; mutant
        1. region g:601-676 [138927] picpiclink
      45. 2o6v picpic
        automatically matched to d1gjza_
        complexed with mes, slz, so4; mutant
        1. region f:501-551 [138926] picpiclink
      46. 2o6v picpic
        complexed with mes, slz, so4; mutant
        1. region d:301-376 [145715] picpiclink
      47. 2o6v picpic
        automatically matched to 2O6V D:301-376
        complexed with mes, slz, so4; mutant
        1. region h:702-776 [145716] picpiclink
      48. 1aar picpic
        di-ubiquitin
        1. chain a [37586] picpiclink
        2. chain b [37587] picpiclink
      49. 1nbf picpicxref
        complex with USP7
        complexed with glz
        1. chain c [80389] picpiclink
        2. chain d [80390] picpiclink
      50. 2fif picpicxrefxrefxref
        automatically matched to d1aara_
        complexed with so4, zn
        1. region a:1-73 [133518] picpiclink
      51. 2fif picpicxrefxrefxref
        automatically matched to d1aara_
        complexed with so4, zn
        1. region c:1-73 [133520] picpiclink
      52. 2fif picpicxrefxrefxref
        automatically matched to d1aara_
        complexed with so4, zn
        1. region e:1-73 [133522] picpiclink
      53. 1wr6 picpicxrefxrefxrefxref
        automatically matched to d1aara_
        1. region e:1-72 [121186] picpiclink
      54. 1wr6 picpicxrefxrefxrefxref
        automatically matched to d1aara_
        1. region f:1-73 [121187] picpiclink
      55. 1wr6 picpicxrefxrefxrefxref
        automatically matched to d1aara_
        1. region g:1-72 [121188] picpiclink
      56. 1wr6 picpicxrefxrefxrefxref
        automatically matched to d1aara_
        1. region h:1-74 [121189] picpiclink
      57. 3dvg picpicxrefxrefxrefxref
        automatically matched to d1aara_
        mutant
        1. region x:1-73 [157892] picpiclink
      58. 3dvg picpicxrefxrefxrefxref
        automatically matched to d1gjza_
        mutant
        1. region y:1-51 [157893] picpiclink
      59. 3dvn picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1aara_
        mutant
        1. region u:1-73 [157902] picpiclink
      60. 3dvn picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1aara_
        mutant
        1. region x:1-73 [157904] picpiclink
      61. 3dvn picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1gjza_
        mutant
        1. region v:1-51 [157903] picpiclink
      62. 3dvn picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1gjza_
        mutant
        1. region y:1-51 [157905] picpiclink
      63. 1tbe picpic
        tetra-ubiquitin
        1. chain a [37588] picpiclink
        2. chain b [37589] picpiclink
      64. 1f9j picpic
        a new crystal form of tetraubiquitin
        1. chain a [37590] picpiclink
        2. chain b [37591] picpiclink
      65. 2gmi picpicxrefxref
        automatically matched to d1aara_
        mutant
        1. region c:501-576 [135382] picpiclink
      66. 2fid picpicxref
        automatically matched to d1aara_
        complexed with zn
        1. region a:1-73 [133516] picpiclink
      67. 2hth picpicxref
        automatically matched to d1aara_
        1. region a:1-73 [136742] picpiclink
      68. 1yd8 picpicxrefxref
        automatically matched to d1aara_
        1. region u:1-73 [122974] picpiclink
      69. 1yd8 picpicxrefxref
        automatically matched to d1aara_
        1. region v:1-73 [122975] picpiclink
      70. 2pe9 picpic
        automatically matched to d1aara_
        1. region a:1-72 [149399] picpiclink
      71. 2pe9 picpic
        automatically matched to d1aara_
        1. region b:1-72 [149400] picpiclink
      72. 2pea picpic
        automatically matched to d1aara_
        1. region a:1-72 [149401] picpiclink
      73. 2pea picpic
        automatically matched to d1aara_
        1. region b:1-72 [149402] picpiclink
      74. 1d3z picpic
        1. chain a [37592] picpiclink
      75. 2k6d picpic
        automatically matched to d1aara_
        1. region b:1-73 [148276] picpiclink
      76. 2z59 picpic
        automatically matched to d1aara_
        1. region b:1-73 [154162] picpiclink
      77. 2nr2 picpic
        automatically matched to d1aara_
        1. region a:1-76 [138518] picpiclink
      78. 1gjz picpic
        1. chain a [65223] picpiclink
        2. chain b [65224] picpiclink
      79. 1zgu picpicxref
        mutant
        1. region b:1-76 [125062] picpiclink
      80. 2bgf picpic
        automatically matched to d1aara_
        1. region a:1-76 [128476] picpiclink
      81. 2bgf picpic
        automatically matched to d1aara_
        1. region b:1-76 [128477] picpiclink
      82. 1xqq picpic
        automatically matched to d1aara_
        1. region a:1-76 [122240] picpiclink
      83. 2dx5 picpicxref
        automatically matched to d1aara_
        1. region b:1-73 [131867] picpiclink
      84. 2den picpic
        automatically matched to d1aara_
        mutant
        1. region b:1-76 [131432] picpiclink
      85. 1fxt picpicxref
        1. chain b [65056] picpiclink
      86. 2jy6 picpic
        automatically matched to d1aara_
        1. region a:1-73 [148238] picpiclink
      87. 2k39 picpic
        automatically matched to d1aara_
        1. region a:1-73 [148263] picpiclink
      88. 2jri picpic
        automatically matched to d1aara_
        1. region b:183-255 [148185] picpiclink
      89. 2jri picpic
        automatically matched to d1aara_
        1. region c:259-331 [148186] picpiclink
      90. 2ayo picpicxref
        automatically matched to d1aara_
        1. region b:1-76 [127567] picpiclink
      91. 2fuh picpicxref
        automatically matched to d1aara_
        1. region b:1-76 [134174] picpiclink
      92. 1yx6 picpic
        automatically matched to d1aara_
        1. region b:1-76 [124173] picpiclink
      93. 1yx5 picpic
        automatically matched to d1aara_
        1. region b:1-76 [124172] picpiclink
      94. 1g6j picpic
        Structure in aot reverse micelles
        1. chain a [60319] picpiclink
      95. 1q5w picpicxref
        complexed with zn
        1. chain b [95946] picpiclink
      96. 1v80 picpic
        automatically matched to d1aara_
        1. region a:1-76 [119867] picpiclink
      97. 1v81 picpic
        automatically matched to d1aara_
        1. region a:1-76 [119868] picpiclink
      98. 2jzz picpic
        automatically matched to d1aara_
        1. region a:1-73 [148251] picpiclink
      99. 1p3q picpicxref
        annotated as bovine in PDB, identical to human sequence
        complexed with mse; mutant
        1. chain u [87750] picpiclink
        2. chain v [87751] picpiclink
      100. 1sif picpic
        a multiple hydrophobic core mutant
        1. chain a [105574] picpiclink
      101. 1ud7 picpic
        designed hydrophobic core mutant
        1. chain a [37593] picpiclink
      102. 1c3t picpic
        designed hydrophobic core mutant
        1. chain a [37594] picpiclink
    2. Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932] [89830] (7)
      1. 3cmm picpic
        automatically matched to d1otrb_
        complexed with pro
        1. region b:1-76 [156833] picpiclink
      2. 3cmm picpic
        automatically matched to d1otrb_
        complexed with pro
        1. region d:1-76 [156834] picpiclink
      3. 1otr picpicxref
        1. chain b [87414] picpiclink
      4. 1q0w picpicxref
        1. chain b [95516] picpiclink
      5. 2g3q picpicxref
        automatically matched to d1otrb_
        1. region b:1-76 [134569] picpiclink
      6. 2jt4 picpic
        automatically matched to d1otrb_
        1. region b:1-76 [148198] picpiclink
      7. 1wr1 picpicxref
        automatically matched to d1otrb_
        1. region a:1-76 [121184] picpiclink
    3. Synthetic, based on Saccharomyces cerevisiae sequence [54240] (1)
      1. 1cmx picpicxref
        nearly completely disordered chain D in the crystal structure
        1. chain b [37595] picpiclink
        2. chain d [37596] picpiclink
  2. SUMO-1 (smt3 homologue) [54241]
    1. Human (Homo sapiens) [TaxId: 9606] [54242] (17)
      SQ Q93068
      1. 2uyz picpicxref
        automatically matched to d1tgzb_
        complexed with na; mutant
        1. region b:20-96 [140039] picpiclink
      2. 1wyw picpicxref
        automatically matched to d1tgzb_
        complexed with cl, mg, na
        1. region b:20-97 [121468] picpiclink
      3. 2vrr picpicxref
        automatically matched to d1tgzb_
        complexed with fmt, na
        1. region b:20-97 [153523] picpiclink
      4. 2bf8 picpicxref
        automatically matched to d1tgzb_
        1. region b:21-97 [128412] picpiclink
      5. 2pe6 picpicxref
        automatically matched to d1tgzb_
        1. region b:21-94 [139668] picpiclink
      6. 2iy1 picpicxrefxref
        automatically matched to d1tgzb_
        mutant
        1. region b:15-92 [137788] picpiclink
      7. 2iy1 picpicxrefxref
        automatically matched to d1tgzb_
        mutant
        1. region d:15-92 [137789] picpiclink
      8. 2iy0 picpicxrefxref
        automatically matched to d1tgzb_
        mutant
        1. region b:22-97 [137787] picpiclink
      9. 1y8r picpic
        automatically matched to d1tgzb_
        complexed with atp, mg, zn
        1. region c:20-97 [122761] picpiclink
      10. 1y8r picpic
        automatically matched to d1tgzb_
        complexed with atp, mg, zn
        1. region f:20-97 [122762] picpiclink
      11. 1tgz picpicxref
        complexed with so4
        1. chain b [106902] picpiclink
      12. 2g4d picpicxrefxref
        automatically matched to d1tgzb_
        mutant
        1. region b:20-97 [134590] picpiclink
      13. 2g4d picpicxrefxref
        automatically matched to d1tgzb_
        mutant
        1. region d:20-97 [134591] picpiclink
      14. 1z5s picpicxrefxref
        automatically matched to d1tgzb_
        1. region b:20-97 [124492] picpiclink
      15. 1a5r picpic
        1. chain a [37597] picpiclink
      16. 2io2 picpicxrefxref
        automatically matched to d1tgzb_
        mutant
        1. region b:23-97 [137540] picpiclink
      17. 2asq picpic
        automatically matched to d1tgzb_
        1. region a:21-97 [127269] picpiclink
    2. Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932] [54243] (4)
      1. 1euv picpicxref
        1. chain b [37598] picpiclink
      2. 2eke picpic
        automatically matched to d1euvb_
        mutant
        1. region c:1020-1095 [132283] picpiclink
      3. 2eke picpic
        automatically matched to d1euvb_
        mutant
        1. region d:1020-1094 [132284] picpiclink
      4. 1l2n picpic
        1. chain a [73508] picpiclink
  3. Nedd8 [54244]
    1. Human (Homo sapiens) [TaxId: 9606] [54245] (7)
      SQ Q15843
      1. 1ndd picpic
        complexed with cli, so4
        1. chain a [37599] picpiclink
        2. chain b [37600] picpiclink
        3. chain c [37601] picpiclink
        4. chain d [37602] picpiclink
      2. 2bkr picpicxref
        automatically matched to d1nddb_
        1. region b:1-76 [128711] picpiclink
      3. 1xt9 picpicxref
        1. chain b [116014] picpiclink
      4. 2nvu picpicxrefxrefxrefxref
        automatically matched to d1nddb_
        complexed with atp, mg, zn; mutant
        1. region i:1-76 [138663] picpiclink
      5. 2nvu picpicxrefxrefxrefxref
        automatically matched to d1nddb_
        complexed with atp, mg, zn; mutant
        1. region j:1-76 [138664] picpiclink
      6. 1r4m picpicxrefxref
        complexed with APPBP1 and UBA3
        complexed with zn; mutant
        1. chain i [97007] picpiclink
        2. chain j [97008] picpiclink
        3. chain k [97009] picpiclink
        4. chain l [97010] picpiclink
      7. 1r4n picpicxrefxref
        complexed with APPBP1 and UBA3
        complexed with atp, zn; mutant
        1. chain i [97019] picpiclink
        2. chain j [97020] picpiclink
        3. chain k [97021] picpiclink
        4. chain l [97022] picpiclink
  4. Elongin B [54246]
    1. Human (Homo sapiens) [TaxId: 9606] [54247] (7)
      1. 2c9w picpicxrefxrefxref
        automatically matched to d1lm8b_
        complexed with ni, so4
        1. region b:2-104 [130145] picpiclink
      2. 1lm8 picpicxrefxref
        complexed with hyp
        1. chain b [74033] picpiclink
      3. 1lqb picpicxrefxref
        complexed with hyp, so4
        1. chain a [74184] picpiclink
      4. 2izv picpicxrefxrefxref
        automatically matched to d1lm8b_
        complexed with cl, edo, na
        1. region b:1-105 [137828] picpiclink
      5. 3dcg picpicxrefxref
        automatically matched to d1lm8b_
        1. region a:1-100 [157535] picpiclink
      6. 1vcb picpicxrefxref
        1. chain a [37603] picpiclink
        2. chain d [37604] picpiclink
        3. chain g [37605] picpiclink
        4. chain j [37606] picpiclink
      7. 2jz3 picpicxref
        automatically matched to d1lm8b_
        1. region b:1-106 [148243] picpiclink
    2. Mouse (Mus musculus) [TaxId: 10090] [142930] (1)
      SQ P62869 1-98
      1. 2fnj picpicxrefxref
        1. region b:1-98 [133819] picpiclink
  5. Rub1 [54248]
    1. Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702] [54249] (1)
      1. 1bt0 picpic
        complexed with edo, zn; mutant
        1. chain a [37607] picpiclink
  6. Ubiquitin-like modifier protein hub1 [82579]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [82580] (1)
      1. 1m94 picpic
        1. chain a [78865] picpiclink
  7. Ubiquitin-like N-terminal domain of PLIC-2 [75358]
    1. Human (Homo sapiens) [TaxId: 9606] [75359] (1)
      1. 1j8c picpic
        1. chain a [71601] picpiclink
  8. Ubiquitin-like domain of parkin [89831]
    1. Human (Homo sapiens) [TaxId: 9606] [89832] (1)
      1. 1iyf picpic
        1. chain a [83789] picpiclink
    2. Mouse (Mus musculus) [TaxId: 10090] [89833] (2)
      1. 2zeq picpic
        automatically matched to d1mg8a_
        1. region a:1-78 [154405] picpiclink
      2. 1mg8 picpic
        1. chain a [84958] picpiclink
  9. Ubiquitin-like domain of Rad23 homolog A (Hhr23a) [102775]
    1. Human (Homo sapiens) [TaxId: 9606] [102776] (4)
      1. 1p98 picpic
        1. chain a [94383] picpiclink
      2. 1oqy picpicxrefxref
        flexible linkers excluded
        1. region a:1-77 [93442] picpiclink
      3. 1qze picpicxrefxref
        1. region a:1-77 [96632] picpiclink
      4. 1p9d picpicxref
        complexed with the C-terminal ubiquitin-interacting motif of the proteasome subunit s5a
        1. chain u [94388] picpiclink
  10. Ubiquitin-like domain of Rad23 homolog B (Hhr23B) [102777]
    1. Human (Homo sapiens) [TaxId: 9606] [102778] (2)
      SQ P54727 1-82
      1. 1uel picpicxref
        complexed with the C-terminal ubiquitin-interacting motif of the proteasome subunit s5a
        1. chain a [99265] picpiclink
      2. 1p1a picpic
        1. chain a [104059] picpiclink
  11. Ubiquitin-like protein 5, ubl5 [102779]
    1. Human (Homo sapiens) [TaxId: 9606] [102780] (1)
      1. 1p0r picpic
        1. chain a [93871] picpiclink
    2. Mouse (Mus musculus) [TaxId: 10090] [102781] (1)
      1. 1uh6 picpic
        1. chain a [99394] picpiclink
  12. Hypothetical protein At3g01050 [102782]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [102783] (1)
      1. 1se9 picpic
        1. chain a [98821] picpiclink
  13. Ubiquitin-like protein 3300001g02rik [102784]
    1. Mouse (Mus musculus) [TaxId: 10090] [102785] (1)
      1. 1v2y picpic
        structural genomics
        1. chain a [100275] picpiclink
  14. Ubiquitin-like domain of tubulin folding cofactor B [102786]
    1. Nematode (Caenorhabditis elegans) [TaxId: 6239] [102787] (1)
      1. 1t0y picpic
        1. chain a [99066] picpiclink
    2. Mouse (Mus musculus) [TaxId: 10090] [117798] (1)
      SQ Q9D1E6 11-92
      1. 1v6e picpic
        mutant
        1. chain a [113547] picpiclink
  15. 1700011n24rik protein [110796]
    1. Mouse (Mus musculus) [TaxId: 10090] [110797] (1)
      SQ Q9DAF3 1-89
      1. 1v5o picpic
        Structural genomics target
        1. chain a [108381] picpiclink
  16. 8430435i17rik protein [110798]
    1. Mouse (Mus musculus) [TaxId: 10090] [110799] (1)
      SQ Q8BGR9 3-79
      1. 1v5t picpic
        Structural genomics target
        1. chain a [108385] picpiclink
  17. hypothetical D7wsu128e protein [110800]
    1. Mouse (Mus musculus) [TaxId: 10090] [110801] (1)
      SQ Q78JW9 76-157
      1. 1v86 picpic
        Structural genomics target
        1. chain a [108421] picpiclink
  18. Splicing factor 3 subunit 1, C-terminal domain [117799]
    1. Mouse (Mus musculus) [TaxId: 10090] [117800] (1)
      SQ Q8K4Z5 685-786
      1. 1we7 picpic
        Structural genomics target
        1. chain a [114547] picpiclink
    2. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [117801] (1)
      SQ Q8RXF1 683-780; T5E21.13/At1g14650
      1. 1we6 picpic
        Structural genomics target
        1. chain a [114546] picpiclink
    3. Human (Homo sapiens) [TaxId: 9606] [142931] (1)
      SQ Q15459 704-789
      1. 1zkh picpic
        1. region a:1-86 [125198] picpiclink
  19. Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, HERPUD1 [117802]
    1. Human (Homo sapiens) [TaxId: 9606] [117803] (1)
      SQ Q15011 10-90
      1. 1wgd picpic
        Structural genomics target
        1. chain a [114610] picpiclink
  20. Ubiquitin carboxyl-terminal hydrolase 14 [117804]
    1. Mouse (Mus musculus) [TaxId: 10090] [117805] (1)
      SQ Q9JMA1 3-85
      1. 1wgg picpic
        Structural genomics target
        1. chain a [114612] picpiclink
  21. Ubiquitin-like protein 3, Ubl3 [117806]
    1. Mouse (Mus musculus) [TaxId: 10090] [117807] (1)
      SQ Q9Z2M6 1-103
      1. 1wgh picpic
        Structural genomics target
        1. chain a [114613] picpiclink
  22. 2'-5'-oligoadenylate synthetase-like protein, OASL [117808]
    1. Human (Homo sapiens) [TaxId: 9606] [117809] (1)
      SQ Q15646 434-507
      1. 1wh3 picpic
        Structural genomics target
        1. chain a [114631] picpiclink
  23. Ubiquitin-like protein bab25500 (2010008E23Rik) [117810]
    1. Mouse (Mus musculus) [TaxId: 10090] [117811] (1)
      SQ Q9D8C5 163-244
      1. 1wia picpic
        Structural genomics target
        1. chain a [114664] picpiclink
  24. Tubulin-folding protein TbcE [117812]
    1. Mouse (Mus musculus) [TaxId: 10090] [117813] (1)
      SQ Q8CIV8 441-524
      1. 1wjn picpic
        Structural genomics target
        1. chain a [114703] picpiclink
  25. NEDD8 ultimate buster-1, NUB1 [117814]
    1. Human (Homo sapiens) [TaxId: 9606] [117815] (1)
      SQ Q9Y5A7 75-161
      1. 1wju picpic
        Structural genomics target
        1. chain a [114712] picpiclink
  26. SUMO-2 [117816]
    1. Human (Homo sapiens) [TaxId: 9606] [117817] (13)
      SQ P61956
      1. 1wm3 picpic
        1. chain a [114736] picpiclink
      2. 1wm2 picpic
        1. chain a [114735] picpiclink
      3. 2d07 picpicxref
        automatically matched to d1wm2a_
        1. region b:15-89 [131063] picpiclink
      4. 2io0 picpicxref
        automatically matched to d1wm2a_
        complexed with so4; mutant
        1. region b:16-89 [137536] picpiclink
      5. 2io1 picpicxrefxrefxref
        automatically matched to d1wm2a_
        mutant
        1. region b:15-88 [137537] picpiclink
      6. 2io1 picpicxrefxrefxref
        automatically matched to d1wm2a_
        mutant
        1. region d:15-88 [137538] picpiclink
      7. 2io1 picpicxrefxrefxref
        automatically matched to d1wm2a_
        mutant
        1. region f:15-88 [137539] picpiclink
      8. 2ckh picpicxref
        1. region b:14-92 [130566] picpiclink
      9. 2iyd picpic
        automatically matched to 2CKH B:14-92
        1. region b:14-92 [137800] picpiclink
      10. 2rpq picpic
        automatically matched to d2ckhb1
        1. region a:15-93 [152179] picpiclink
      11. 2io3 picpicxrefxref
        automatically matched to 2CKH B:14-92
        mutant
        1. region b:20-93 [137541] picpiclink
      12. 1wz0 picpic
        1. region a:8-100 [121475] picpiclink
      13. 2awt picpic
        automatically matched to d1wm2a_
        1. region a:12-89 [127475] picpiclink
  27. Bag-family molecular chaperone regulator-1 [142932]
    1. Human (Homo sapiens) [TaxId: 9606] [142933] (1)
      SQ Q99933 72-152
      the BAG domain structure is also known (scop_sp 63494)
      1. 1wxv picpic
        1. region a:7-87 [121409] picpiclink
  28. NPL4-like protein 1 [142934]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [142935] (1)
      SQ Q9LYC2 2-95
      1. 1wf9 picpic
        1. region a:8-101 [120968] picpiclink
  29. Interferon-induced 15 kDa protein [142936]
    1. Human (Homo sapiens) [TaxId: 9606] [142937] (2)
      SQ P05161 2-77! SQ P05161 78-153
      1. 1z2m picpic
        complexed with os4; mutant
        1. region a:3-78 [124387] picpiclink
      2. 1z2m picpic
        complexed with os4; mutant
        1. region a:79-154 [124388] picpiclink
  30. Ubiquitin-like protein smt3a, SUMO-3 [142938]
    1. Human (Homo sapiens) [TaxId: 9606] [142939] (1)
      SQ P55854 14-92
      1. 1u4a picpic
        mutant
        1. region a:14-92 [119526] picpiclink
  31. DSK2 [142940]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [142941] (5)
      SQ P48510 2-74
      1. 2bwf picpic
        automatically matched to 2BWE S:2-74
        complexed with fmt
        1. region a:2-74 [129363] picpiclink
      2. 2bwf picpic
        automatically matched to 2BWE S:2-74
        complexed with fmt
        1. region b:2-74 [129364] picpiclink
      3. 2bwe picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        1. region s:2-74 [129360] picpiclink
      4. 2bwe picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2BWE S:2-74
        1. region t:2-74 [129361] picpiclink
      5. 2bwe picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2BWE S:2-74
        1. region u:3-74 [129362] picpiclink
  32. Ubiquitin-like protein 7 [142942]
    1. Mouse (Mus musculus) [TaxId: 10090] [142943] (1)
      SQ Q91W67 1-94
      1. 1x1m picpic
        1. region a:8-101 [121592] picpiclink
  33. Ubiquitin-like PHD and RING finger domain-containing protein 2 [142944]
    1. Human (Homo sapiens) [TaxId: 9606] [142945] (1)
      SQ Q96PU4 1-76
      1. 1wy8 picpic
        1. region a:8-83 [121437] picpiclink
  34. Ubiquilin-3 [142946]
    1. Human (Homo sapiens) [TaxId: 9606] [142947] (2)
      SQ Q9H347 11-104! SQ Q9H347 15-98
      1. 1yqb picpic
        1. region a:15-98 [123876] picpiclink
      2. 1wx7 picpic
        1. region a:7-100 [121392] picpiclink
  35. Ubiquitin-like PHD and RING finger domain-containing protein 1 [142948]
    1. Human (Homo sapiens) [TaxId: 9606] [142949] (2)
      SQ Q96T88 1-76
      1. 2faz picpic
        1. region a:1-76 [133223] picpiclink
      2. 2faz picpic
        automatically matched to 2FAZ A:1-76
        1. region b:1-72 [133224] picpiclink
  36. 4931431F19Rik [142950]
    1. Mouse (Mus musculus) [TaxId: 10090] [142951] (1)
      SQ Q9D4I8 14-96
      structure of the C-terminal UBA domain is also known (PDB 1vej)
      1. 1wx8 picpic
        1. region a:8-90 [121393] picpiclink
  37. Large proline-rich protein BAT3 [142952]
    1. Human (Homo sapiens) [TaxId: 9606] [142953] (1)
      SQ P46379 17-89
      1. 1wx9 picpic
        1. region a:8-80 [121394] picpiclink
  38. Dendritic cell-derived ubiquitin-like protein [142954]
    1. Human (Homo sapiens) [TaxId: 9606] [142955] (1)
      SQ Q8WUN7 149-228
      1. 1ttn picpic
        1. region a:21-100 [119340] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk