Structural Classification of Proteins

Superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

: N-terminal domain is the classic Rossmann-fold
uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: FwdE/GAPDH domain-like [55346]
core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1
Superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347]
N-terminal domain is the classic Rossmann-fold
uperfamily

Families:

GAPDH-like [55348] (29)
has many additional secondary structures
1. Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [55349]
  1. Escherichia coli [TaxId: 562] [55350] (13)
    SQ P06977
    1. 1gad
      complexed with nad
      1. region o:149-312 [39865]
      2. region p:149-312 [39866]
    2. 2vyn
      automatically matched to d1dc3a2
      complexed with fmt, nad
      1. region a:149-311 [153708]
    3. 2vyn
      automatically matched to d1dc3a2
      complexed with fmt, nad
      1. region b:149-311 [153710]
    4. 2vyn
      automatically matched to d1dc3a2
      complexed with fmt, nad
      1. region c:149-311 [153712]
    5. 1s7c
      complexed with mes, so4
      1. region a:149-312 [105347]
    6. 1gae
      complexed with nad; mutant
      1. region o:149-312 [39869]
      2. region p:149-312 [39870]
    7. 2vyv
      automatically matched to d1dc3a2
      complexed with 1gp, fmt, nad
      1. region a:149-311 [153716]
    8. 2vyv
      automatically matched to d1dc3a2
      complexed with 1gp, fmt, nad
      1. region b:149-311 [153718]
    9. 2vyv
      automatically matched to d1dc3a2
      complexed with 1gp, fmt, nad
      1. region c:149-311 [153720]
    10. 1dc5
      1. region a:149-312 [39867]
      2. region b:149-312 [39868]
    11. 1dc6
      complexed with nad
      1. region a:149-312 [39871]
      2. region b:149-312 [39872]
    12. 1dc3
      1. region a:149-312 [39873]
      2. region b:149-312 [39874]
    13. 1dc4
      complexed with g3h
      1. region a:149-312 [39875]
      2. region b:149-312 [39876]
  2. Bacillus stearothermophilus, nca 1503 [TaxId: 1422] [55351] (14)
    1. 3cmc
      automatically matched to d1gd1o2
      complexed with edo, g3h, gol, nad, so4
      1. region o:149-312 [156801]
    2. 3cmc
      automatically matched to d1gd1o2
      complexed with edo, g3h, gol, nad, so4
      1. region p:149-312 [156803]
    3. 3cmc
      automatically matched to d1gd1o2
      complexed with edo, g3h, gol, nad, so4
      1. region q:149-312 [156805]
    4. 3cmc
      automatically matched to d1gd1o2
      complexed with edo, g3h, gol, nad, so4
      1. region r:149-312 [156807]
    5. 1gd1
      complexed with nad, so4
      1. region o:149-312 [39877]
      2. region p:149-312 [39878]
      3. region q:149-312 [39879]
      4. region r:149-312 [39880]
    6. 1nqo
      complexed with g3h, nad; mutant
      1. region a:149-312 [86045]
      2. region c:149-312 [86047]
      3. region o:149-312 [86049]
      4. region q:149-312 [86051]
    7. 1npt
      complexed with nad, so4; mutant
      1. region o:149-312 [85988]
      2. region p:149-312 [85990]
      3. region q:149-312 [85992]
      4. region r:149-312 [85994]
    8. 1nq5
      complexed with nad, so4; mutant
      1. region a:149-312 [86009]
      2. region c:149-312 [86011]
      3. region o:149-312 [86013]
      4. region q:149-312 [86015]
    9. 1nqa
      complexed with g3h, nad; mutant
      1. region o:149-312 [86017]
      2. region p:149-312 [86019]
      3. region q:149-312 [86021]
      4. region r:149-312 [86023]
    10. 1dbv
      complexed with nad, so4; mutant
      1. region o:149-312 [39881]
      2. region p:149-312 [39882]
      3. region q:149-312 [39883]
      4. region r:149-312 [39884]
    11. 4dbv
      complexed with ndp, so4; mutant
      1. region o:149-312 [39889]
      2. region p:149-312 [39890]
      3. region q:149-312 [39891]
      4. region r:149-312 [39892]
    12. 2dbv
      complexed with ndp, so4; mutant
      1. region o:149-312 [39885]
      2. region p:149-312 [39886]
      3. region q:149-312 [39887]
      4. region r:149-312 [39888]
    13. 2gd1
      complexed with so4
      1. region o:149-312 [39893]
      2. region p:149-312 [39894]
      3. region q:149-312 [39895]
      4. region r:149-312 [39896]
    14. 3dbv
      complexed with nad, so4; mutant
      1. region o:149-312 [39897]
      2. region p:149-312 [39898]
      3. region q:149-312 [39899]
      4. region r:149-312 [39900]
  3. Achromobacter xylosoxidans [TaxId: 85698] [89987] (1)
    formerly Alcaligenes xylosoxidans
    1. 1obf
      complexed with csw, k, pg4, so4
      1. region o:153-314 [86769]
      2. region p:153-314 [86771]
  4. Thermus aquaticus [TaxId: 271] [55352] (13)
    1. 2g82
      automatically matched to d1cero2
      complexed with gol, ipa, na, nad, pge
      1. region a:149-310 [134747]
    2. 2g82
      automatically matched to d1cero2
      complexed with gol, ipa, na, nad, pge
      1. region b:149-310 [134749]
    3. 2g82
      automatically matched to d1cero2
      complexed with gol, ipa, na, nad, pge
      1. region c:149-310 [134751]
    4. 2g82
      automatically matched to d1cero2
      complexed with gol, ipa, na, nad, pge
      1. region d:149-310 [134753]
    5. 2g82
      automatically matched to d1cero2
      complexed with gol, ipa, na, nad, pge
      1. region o:149-310 [134755]
    6. 2g82
      automatically matched to d1cero2
      complexed with gol, ipa, na, nad, pge
      1. region p:149-310 [134757]
    7. 2g82
      automatically matched to d1cero2
      complexed with gol, ipa, na, nad, pge
      1. region q:149-310 [134759]
    8. 2g82
      automatically matched to d1cero2
      complexed with gol, ipa, na, nad, pge
      1. region r:149-310 [134761]
    9. 1cer
      complexed with nad
      1. region o:149-312 [39901]
      2. region q:149-312 [39902]
      3. region p:149-312 [39903]
      4. region r:149-312 [39904]
    10. 1cer
      duplicate of 1CER O:149-312
      complexed with nad
      1. region a:149-312 [118443]
    11. 1cer
      duplicate of 1CER O:149-312
      complexed with nad
      1. region b:149-312 [118445]
    12. 1cer
      duplicate of 1CER O:149-312
      complexed with nad
      1. region c:149-312 [118447]
    13. 1cer
      duplicate of 1CER O:149-312
      complexed with nad
      1. region d:149-312 [118449]
  5. Thermus thermophilus [TaxId: 274] [103101] (1)
    1. 1vc2
      complexed with nad
      1. region a:149-310 [100556]
  6. Thermotoga maritima [TaxId: 2336] [55353] (1)
    1. 1hdg
      complexed with nad, so4
      1. region o:149-312 [39905]
      2. region q:149-312 [39906]
  7. Archaeon Sulfolobus solfataricus [TaxId: 2287] [55354] (1)
    1. 1b7g
      CASP3
      complexed with so4; mutant
      1. region o:139-300 [39907]
      2. region q:139-300 [39908]
  8. Archaeon Methanothermus fervidus [TaxId: 2180] [55355] (1)
    1. 1cf2
      complexed with nap, so4
      1. region o:139-303 [39909]
      2. region q:139-303 [39910]
      3. region p:139-303 [39911]
      4. region r:139-303 [39912]
  9. Trypanosoma brucei brucei, glycosome [TaxId: 5702] [55356] (1)
    1. 1gga
      complexed with nad, so4
      1. region o:165-333 [39913]
      2. region p:165-333 [39914]
      3. region q:165-333 [39915]
      4. region r:165-333 [39916]
      5. region a:165-333 [39917]
      6. region b:165-333 [39918]
  10. Trypanosoma cruzi [TaxId: 5693] [75483] (7)
    1. 1k3t
      complexed with brz
      1. region a:165-333 [72023]
      2. region b:165-333 [72025]
      3. region c:165-333 [72027]
      4. region d:165-333 [72029]
    2. 3dmt
      automatically matched to d1k3ta2
      complexed with gol, nad
      1. region a:165-333 [157808]
    3. 3dmt
      automatically matched to d1k3ta2
      complexed with gol, nad
      1. region b:165-333 [157810]
    4. 3dmt
      automatically matched to d1k3ta2
      complexed with gol, nad
      1. region c:165-333 [157812]
    5. 3dmt
      automatically matched to d1k3ta2
      complexed with gol, nad
      1. region d:165-333 [157814]
    6. 1ml3
      complexed with cyx, nad
      1. region a:165-333 [85002]
      2. region b:165-333 [85004]
      3. region c:165-333 [85006]
      4. region d:165-333 [85008]
    7. 1qxs
      complexed with nad, s70
      1. region a:165-333 [96555]
      2. region b:165-333 [96557]
      3. region c:165-333 [96559]
      4. region d:165-333 [96561]
  11. Leishmania mexicana [TaxId: 5665] [55357] (5)
    1. 1i32
      complexed with nmd
      1. region a:166-334 [65994]
      2. region b:166-334 [65996]
      3. region c:166-334 [65998]
      4. region d:166-334 [66000]
      5. region e:166-334 [66002]
      6. region f:166-334 [66004]
    2. 1gyp
      complexed with nad, po4
      1. region a:166-334 [39919]
      2. region b:166-334 [39920]
      3. region c:166-334 [39921]
      4. region d:166-334 [39922]
    3. 1i33
      complexed with tnd
      1. region a:166-334 [66006]
      2. region b:166-334 [66008]
      3. region c:166-334 [66010]
      4. region d:166-334 [66012]
      5. region e:166-334 [66014]
      6. region f:166-334 [66016]
    4. 1a7k
      complexed with nad, po4
      1. region a:166-334 [39923]
      2. region b:166-334 [39924]
      3. region c:166-334 [39925]
      4. region d:166-334 [39926]
    5. 1gyq
      complexed with nbd
      1. region a:166-334 [39927]
      2. region b:166-334 [39928]
      3. region c:166-334 [39929]
      4. region d:166-334 [39930]
  12. American lobster (Homarus americanus) [TaxId: 6706] [55358] (2)
    1. 4gpd
      1. region 1:148-311 [39931]
      2. region 2:148-311 [39932]
      3. region 3:148-311 [39933]
      4. region 4:148-311 [39934]
    2. 1gpd
      complexed with ips, nad, sps
      1. region g:149-312 [39935]
      2. region r:149-312 [39936]
  13. South China Sea lobster (Palinurus versicolor) [TaxId: 150436] [55359] (5)
    1. 1dss
      complexed with nad, so4
      1. region g:149-312 [39937]
      2. region r:149-312 [39938]
    2. 1szj
      complexed with nad, so4
      1. region g:149-312 [39939]
      2. region r:149-312 [39940]
    3. 1crw
      1. region g:149-312 [39941]
      2. region r:149-312 [39942]
    4. 1ihx
      complexed with snd, so4
      1. region a:149-312 [71212]
      2. region b:149-312 [71214]
      3. region c:149-312 [71216]
      4. region d:149-312 [71218]
    5. 1ihy
      complexed with apr, so4
      1. region a:149-312 [71220]
      2. region b:149-312 [71222]
      3. region c:149-312 [71224]
      4. region d:149-312 [71226]
  14. Human (Homo sapiens) [TaxId: 9606] [55360] (1)
    1. 3gpd
      complexed with ips, nad, sps
      1. region r:151-314 [39943]
      2. region g:151-314 [39944]
  15. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [103102] (1)
    1. 1j0x
      complexed with nad
      1. region o:149-312 [90751]
      2. region p:149-312 [90753]
      3. region q:149-312 [90755]
      4. region r:149-312 [90757]
  16. Spinach (Spinacia oleracea) [TaxId: 3562] [69769] (24)
    SQ P19866
    1. 1rm4
      complexed with ndp, so4
      1. region a:149-312 [105001]
      2. region b:149-312 [105003]
      3. region o:149-312 [105005]
    2. 1rm5
      complexed with ndp, so4; mutant
      1. region a:149-312 [105007]
      2. region b:149-312 [105009]
      3. region o:149-312 [105011]
    3. 1rm3
      complexed with ndp, so4; mutant
      1. region a:149-312 [104995]
      2. region b:149-312 [104997]
      3. region o:149-312 [104999]
    4. 1nbo
      complexed with nad, so4
      1. region o:149-312 [85531]
      2. region a:149-312 [85527]
      3. region b:149-312 [85529]
    5. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region a:149-312 [139717]
    6. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region b:149-312 [139719]
    7. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region c:149-312 [139721]
    8. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region d:149-312 [139723]
    9. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region h:149-312 [139725]
    10. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region i:149-312 [139727]
    11. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region l:149-312 [139729]
    12. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region m:149-312 [139731]
    13. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region o:149-312 [139733]
    14. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region p:149-312 [139735]
    15. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region q:149-312 [139737]
    16. 2pkr
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region r:149-312 [139739]
    17. 1jn0
      complexed with ndp, so4
      1. region o:149-312 [66920]
      2. region a:149-312 [66916]
      3. region b:149-312 [66918]
    18. 2hki
      automatically matched to d1nboa2
      complexed with so4
      1. region a:153-315 [136552]
    19. 2pkq
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region p:149-312 [139711]
    20. 2pkq
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region r:149-312 [139713]
    21. 2pkq
      automatically matched to d1nboa2
      complexed with ndp, so4
      1. region s:149-312 [139715]
    22. 2pkq
      complexed with ndp, so4
      1. region o:149-312 [145749]
    23. 2pkq
      automatically matched to 2PKQ O:149-312
      complexed with ndp, so4
      1. region q:149-312 [145751]
    24. 2pkq
      automatically matched to 2PKQ O:149-312
      complexed with ndp, so4
      1. region t:149-312 [145753]
  17. Human(Homo sapiens), liver isoform [TaxId: 9606] [143535] (8)
    SQ P04406 151-314
    1. 1u8f
      automatically matched to 1ZNQ O:152-315
      complexed with nad
      1. region o:152-315 [119627]
    2. 1u8f
      automatically matched to 1ZNQ O:152-315
      complexed with nad
      1. region p:152-315 [119629]
    3. 1u8f
      automatically matched to 1ZNQ O:152-315
      complexed with nad
      1. region q:152-315 [119631]
    4. 1u8f
      automatically matched to 1ZNQ O:152-315
      complexed with nad
      1. region r:152-315 [119633]
    5. 1znq
      complexed with nad
      1. region o:152-315 [125402]
    6. 1znq
      automatically matched to 1ZNQ O:152-315
      complexed with nad
      1. region p:152-315 [125404]
    7. 1znq
      automatically matched to 1ZNQ O:152-315
      complexed with nad
      1. region q:152-315 [125406]
    8. 1znq
      automatically matched to 1ZNQ O:152-315
      complexed with nad
      1. region r:152-315 [125408]
  18. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [143536] (12)
    SQ Q8IKK7 153-318! SQ Q8T6B1 153-318
    1. 2b4r
      complexed with aes, gol, nad; mutant
      1. region o:153-318 [127846]
    2. 2b4r
      automatically matched to 2B4R O:153-318
      complexed with aes, gol, nad; mutant
      1. region p:153-318 [127848]
    3. 2b4r
      automatically matched to 2B4R O:153-318
      complexed with aes, gol, nad; mutant
      1. region q:153-318 [127850]
    4. 2b4r
      automatically matched to 2B4R O:153-318
      complexed with aes, gol, nad; mutant
      1. region r:153-318 [127852]
    5. 2b4t
      automatically matched to 2B4R O:153-318
      complexed with aes, nad; mutant
      1. region o:153-318 [127857]
    6. 2b4t
      automatically matched to 2B4R O:153-318
      complexed with aes, nad; mutant
      1. region p:153-318 [127859]
    7. 2b4t
      automatically matched to 2B4R O:153-318
      complexed with aes, nad; mutant
      1. region q:153-318 [127861]
    8. 2b4t
      automatically matched to 2B4R O:153-318
      complexed with aes, nad; mutant
      1. region r:153-318 [127863]
    9. 1ywg
      complexed with nad
      1. region o:153-318 [124146]
    10. 1ywg
      automatically matched to 1YWG O:153-318
      complexed with nad
      1. region p:153-318 [124148]
    11. 1ywg
      automatically matched to 1YWG O:153-318
      complexed with nad
      1. region q:153-318 [124150]
    12. 1ywg
      automatically matched to 1YWG O:153-318
      complexed with nad
      1. region r:153-318 [124152]
  19. Archaeon Pyrococcus horikoshii [TaxId: 53953] [143537] (4)
    SQ O59494 140-301
    1. 2czc
      complexed with nad, po4
      1. region a:140-301 [131044]
    2. 2czc
      automatically matched to 2CZC A:140-301
      complexed with nad, po4
      1. region b:140-301 [145054]
    3. 2czc
      automatically matched to 2CZC A:140-301
      complexed with nad, po4
      1. region c:140-301 [145056]
    4. 2czc
      automatically matched to 2CZC A:140-301
      complexed with nad, po4
      1. region d:140-301 [145058]
2. Aspartate beta-semialdehyde dehydrogenase [55361]
  1. Escherichia coli [TaxId: 562] [55362] (4)
    SQ P00353
    1. 1t4b
      complexed with na
      1. region a:134-354 [106407]
      2. region b:134-354 [106409]
    2. 1t4d
      1. region a:134-354 [106413]
      2. region b:134-354 [106415]
      3. region c:134-354 [106417]
    3. 1brm
      1. region a:134-354 [39945]
      2. region b:134-354 [39946]
      3. region c:134-354 [39947]
    4. 1gl3
      complexed with cys, ndp
      1. region a:134-354 [65283]
      2. region b:134-354 [65285]
  2. Vibrio cholerae [TaxId: 666] [82725] (2)
    1. 1mb4
      complexed with cys, ndp
      1. region a:133-354 [78909]
      2. region b:133-354 [78911]
    2. 1mc4
      1. region a:133-354 [84928]
  3. Haemophilus influenzae [TaxId: 727] [103103] (12)
    SQ P44801
    1. 1pqu
      complexed with cac, cys, nap; mutant
      1. region a:134-357 [104289]
      2. region b:134-357 [104291]
      3. region c:134-357 [104293]
      4. region d:134-357 [104295]
    2. 1nwc
      1. region a:134-357 [92230]
      2. region b:134-357 [92232]
    3. 1nwh
      complexed with hti
      1. region a:134-357 [92234]
      2. region b:134-357 [92236]
    4. 1oza
      mutant
      1. region a:134-357 [104046]
    5. 1pqp
      complexed with as2, po4; mutant
      1. region a:134-357 [104287]
    6. 1pu2
      complexed with hti; mutant
      1. region a:134-357 [104309]
    7. 1pr3
      complexed with po4; mutant
      1. region a:134-357 [104301]
    8. 1tb4
      complexed with pej
      1. region a:134-357 [112381]
    9. 1nx6
      complexed with hti, po4
      1. region a:134-357 [92284]
    10. 1q2x
      complexed with hti; mutant
      1. region a:134-357 [104504]
      2. region b:134-357 [104506]
    11. 1ta4
      complexed with art
      1. region a:134-357 [112374]
    12. 1ps8
      mutant
      1. region a:134-357 [104305]
  4. Streptococcus pneumoniae [TaxId: 1313] [143538] (11)
    SQ Q8DQ00 128-329
    1. 2gz1
      automatically matched to 2GYY A:128-329
      complexed with nap
      1. region a:128-329 [135888]
    2. 2gz1
      automatically matched to 2GYY A:128-329
      complexed with nap
      1. region b:128-329 [135890]
    3. 2gyy
      1. region a:128-329 [135880]
    4. 2gyy
      automatically matched to 2GYY A:128-329
      1. region b:128-329 [135882]
    5. 2gyy
      automatically matched to 2GYY A:128-329
      1. region c:128-329 [135884]
    6. 2gyy
      automatically matched to 2GYY A:128-329
      1. region d:128-329 [135886]
    7. 2gz2
      automatically matched to 2GYY A:128-329
      complexed with a2p
      1. region a:128-329 [135892]
    8. 2gz2
      automatically matched to 2GYY A:128-329
      complexed with a2p
      1. region b:128-329 [135894]
    9. 2gz3
      automatically matched to 2GYY A:128-329
      complexed with as2, nap
      1. region a:128-329 [135896]
    10. 2gz3
      automatically matched to 2GYY A:128-329
      complexed with as2, nap
      1. region c:128-329 [135898]
    11. 2gz3
      automatically matched to 2GYY A:128-329
      complexed with as2, nap
      1. region d:128-329 [135900]
3. Acetaldehyde dehydrogenase (acylating) [89988]
  1. Pseudomonas sp. [TaxId: 306] [89989] (1)
    1. 1nvm
      complexed with mn, mpd, nad, oxl, sul
      1. region b:132-286 [86252]
      2. region d:132-286 [86256]
      3. region f:132-286 [86260]
      4. region h:132-286 [86264]
4. N-acetyl-gamma-glutamyl-phosphate reductase ArgC [111046]
  1. Thermotoga maritima [TaxId: 2336] [111047] (1)
    SQ Q9X2A2
    1. 1vkn
      Structural genomics target
      1. region a:145-307 [108677]
      2. region b:145-307 [108679]
      3. region c:145-307 [108681]
      4. region d:145-307 [108683]
  2. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [118038] (5)
    SQ O82187 15-359
    1. 2q49
      automatically matched to d1xyga2
      1. region a:163-326 [139832]
    2. 2q49
      automatically matched to d1xyga2
      1. region b:163-326 [139834]
    3. 2q49
      automatically matched to d1xyga2
      1. region c:163-326 [139836]
    4. 2q49
      automatically matched to d1xyga2
      1. region d:163-326 [139838]
    5. 1xyg
      1. region a:163-326 [116222]
      2. region b:163-326 [116224]
      3. region c:163-326 [116226]
      4. region d:163-326 [116228]
  3. Salmonella typhimurium [TaxId: 90371] [143539] (1)
    SQ Q8ZKL8 154-308
    1. 2g17
      complexed with so4
      1. region a:154-308 [134513]
5. Putative semialdehyde dehydrogenase [143540]
  1. Rice (Oryza sativa) [TaxId: 4530] [143541] (4)
    SQ Q6AV34 219-383
    1. 2cvo
      1. region a:219-383 [130878]
    2. 2cvo
      automatically matched to 2CVO A:219-383
      1. region b:219-383 [130880]
    3. 2cvo
      automatically matched to 2CVO A:219-383
      1. region c:219-383 [130882]
    4. 2cvo
      automatically matched to 2CVO A:219-383
      1. region d:219-383 [130884]
6. Usg-1 protein homolog PA3116 [143542]
  1. Pseudomonas aeruginosa [TaxId: 287] [143543] (1)
    SQ O87014 130-319
    1. 2hjs
      complexed with dio
      1. region a:130-319 [136548]
Homoserine dehydrogenase-like [55363] (2)
1. Homoserine dehydrogenase [55364]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [55365] (4)
    SQ P31116
    1. 1ebf
      complexed with na, nad
      1. region a:151-340 [39948]
      2. region b:151-340 [39949]
    2. 1ebu
      complexed with hse, na, nda
      1. region a:151-340 [39950]
      2. region b:151-340 [39951]
      3. region c:151-340 [39952]
      4. region d:151-340 [39953]
    3. 1q7g
      complexed with na, nho
      1. region a:151-340 [96039]
      2. region b:151-340 [96041]
    4. 1tve
      complexed with 178
      1. region a:151-340 [107355]
      2. region b:151-340 [107357]
2. Saccharopine reductase [55366]
  contains an alpha-helical subdomain inserted in the common fold and other additional secondary structures
  1. Rice blast fungus (Magnaporthe grisea) [TaxId: 148305] [55367] (3)
    1. 1e5q
      complexed with ndp
      1. region a:125-391 [39955]
      2. region b:125-391 [39956]
      3. region c:125-391 [39957]
      4. region d:125-391 [39958]
      5. region e:125-391 [39959]
      6. region f:125-391 [39960]
      7. region g:125-391 [39961]
      8. region h:125-391 [39962]
    2. 1ff9
      complexed with so4
      1. region a:125-391 [39954]
    3. 1e5l
      1. region a:125-391 [39963]
      2. region b:125-391 [39964]
Dihydrodipicolinate reductase-like [55368] (12)
1. Diaminopimelic acid dehydrogenase (DAPDH) [55369]
  distantly related to dihydrodipicolinate reductase
  larger alpha+beta subdomain substitutes for one helix and one strand of the common fold
  1. Corynebacterium glutamicum [TaxId: 1718] [55370] (4)
    1. 1f06
      complexed with 2np, ndp
      1. region a:119-268 [59557]
      2. region b:619-768 [59559]
    2. 3dap
      complexed with da3, ndp
      1. region a:119-268 [39966]
      2. region b:119-268 [39967]
    3. 2dap
      complexed with api
      1. region a:119-268 [39965]
    4. 1dap
      complexed with act, ndp
      1. region a:119-268 [39968]
      2. region b:119-268 [39969]
2. Dihydrodipicolinate reductase [55371]
  1. Escherichia coli [TaxId: 562] [55372] (5)
    1. 1dih
      complexed with ndp
      1. region a:131-240 [39971]
    2. 1dru
      complexed with nah
      1. region a:131-240 [39970]
    3. 1drw
      complexed with nhd
      1. region a:131-240 [39972]
    4. 1drv
      complexed with nac
      1. region a:131-240 [39973]
    5. 1arz
      complexed with k, nad, pdc, po4
      1. region a:131-240 [39974]
      2. region b:131-240 [39975]
      3. region c:131-240 [39976]
      4. region d:131-240 [39977]
  2. Mycobacterium tuberculosis [TaxId: 1773] [103104] (14)
    1. 1yl7
      automatically matched to d1c3va2
      complexed with mg, nad
      1. region a:106-214 [123626]
    2. 1yl7
      automatically matched to d1c3va2
      complexed with mg, nad
      1. region b:106-214 [123628]
    3. 1yl7
      automatically matched to d1c3va2
      complexed with mg, nad
      1. region c:106-214 [123630]
    4. 1yl7
      automatically matched to d1c3va2
      complexed with mg, nad
      1. region d:106-214 [123632]
    5. 1yl7
      automatically matched to d1c3va2
      complexed with mg, nad
      1. region e:106-214 [123634]
    6. 1yl7
      automatically matched to d1c3va2
      complexed with mg, nad
      1. region f:106-214 [123636]
    7. 1yl7
      automatically matched to d1c3va2
      complexed with mg, nad
      1. region g:106-214 [123638]
    8. 1yl7
      automatically matched to d1c3va2
      complexed with mg, nad
      1. region h:106-214 [123640]
    9. 1yl5
      automatically matched to d1c3va2
      complexed with mg
      1. region a:106-214 [123618]
    10. 1yl5
      automatically matched to d1c3va2
      complexed with mg
      1. region b:106-214 [123620]
    11. 1p9l
      complexed with nad, pdc, pg4
      1. region a:106-214 [94394]
      2. region b:106-214 [94396]
    12. 1c3v
      complexed with ndp, pdc, pg4
      1. region a:606-714 [90412]
      2. region b:1106-1214 [90414]
    13. 1yl6
      automatically matched to d1c3va2
      complexed with mg
      1. region a:106-214 [123622]
    14. 1yl6
      automatically matched to d1c3va2
      complexed with mg
      1. region b:106-214 [123624]
  3. Thermotoga maritima [TaxId: 2336] [111048] (1)
    SQ Q9X1K8
    1. 1vm6
      Structural genomics target
      complexed with act, edo, nad, pg4
      1. region a:97-182 [108877]
      2. region b:97-182 [108879]
      3. region c:97-182 [108881]
      4. region d:97-182 [108883]
3. Myo-inositol 1-phosphate synthase [75484]
  1. Mycobacterium tuberculosis [TaxId: 1773] [75485] (1)
    1. 1gr0
      complexed with cac, nad, zn
      1. region a:201-311 [70380]
  2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [75486] (9)
    SQ P11986
    1. 1p1j
      complexed with cry, nai, po4
      1. region a:323-437 [87688]
      2. region b:323-437 [87690]
    2. 1rm0
      complexed with d6p, mn, nai
      1. region a:323-437 [104991]
      2. region b:323-437 [104993]
    3. 1p1h
      complexed with nad
      1. region a:323-437 [87676]
      2. region b:323-437 [87678]
      3. region c:323-437 [87680]
      4. region d:323-437 [87682]
    4. 1p1k
      complexed with nai
      1. region a:323-437 [87692]
      2. region b:323-437 [87694]
    5. 1la2
      complexed with mse, nad
      1. region a:323-437 [73774]
      2. region b:323-437 [73776]
      3. region c:323-437 [73778]
      4. region d:323-437 [73780]
    6. 1p1i
      complexed with nad
      1. region a:323-437 [87684]
      2. region b:323-437 [87686]
    7. 1p1f
      1. region a:323-437 [87672]
      2. region b:323-437 [87674]
    8. 1jki
      complexed with dg6, nai, nh4
      1. region a:323-437 [71705]
      2. region b:323-437 [71707]
    9. 1jkf
      complexed with nad
      1. region a:323-437 [71701]
      2. region b:323-437 [71703]
  3. Archaeoglobus fulgidus [TaxId: 2234] [111049] (1)
    SQ O28480
    1. 1u1i
      complexed with k, nad, po4
      1. region a:228-332 [107583]
      2. region b:628-732 [107585]
      3. region c:1028-1132 [107587]
      4. region d:1428-1532 [107589]
  4. Caenorhabditis elegans [TaxId: 6239] [111050] (1)
    SQ Q18664
    1. 1vko
      Structural genomics target
      complexed with cl, iod, k, nad, pop
      1. region a:315-428 [108685]
4. Hypothetical protein TM1419 [103105]
  myo-inositol 1-phosphate synthase-related protein
  1. Thermotoga maritima [TaxId: 2336] [103106] (1)
    1. 1vjp
      structural genomics
      complexed with cl, mo2, nad
      1. region a:210-316 [100829]
5. Hypothetical protein TM1643 [75487]
  1. Thermotoga maritima [TaxId: 2336] [75488] (2)
    1. 1j5p
      complexed with nad
      1. region a:109-211 [71577]
    2. 1h2h
      complexed with mse, nad
      1. region a:109-211 [70861]
6. 1-deoxy-D-xylulose-5-phosphate reductoisomerase [69770]
  1. Escherichia coli [TaxId: 562] [69771] (12)
    SQ P45568
    1. 1q0q
      complexed with dxp, ndp
      1. region a:126-274 [104466]
      2. region b:126-274 [104469]
    2. 1q0h
      complexed with cit, fom, ndp
      1. region a:126-274 [104442]
    3. 1jvs
      complexed with mse, ndp, so4
      1. region a:126-274 [77189]
      2. region b:126-274 [77192]
    4. 2egh
      automatically matched to d1jvsa3
      complexed with fom, mg, ndp
      1. region a:126-274 [132123]
    5. 2egh
      automatically matched to d1jvsa3
      complexed with fom, mg, ndp
      1. region b:126-274 [132126]
    6. 1t1r
      complexed with imb, so4
      1. region a:126-274 [106265]
      2. region b:126-274 [106269]
    7. 1t1s
      complexed with cbq, mg, so4
      1. region a:126-274 [106273]
      2. region b:126-274 [106277]
    8. 1q0l
      complexed with fom, ndp
      1. region a:126-274 [104457]
    9. 1ono
      complexed with mw3
      1. region a:126-274 [87161]
      2. region b:126-274 [87164]
    10. 1k5h
      1. region a:126-274 [68194]
      2. region b:126-274 [68197]
      3. region c:126-274 [68200]
    11. 1onn
      1. region a:126-274 [87155]
      2. region b:126-274 [87158]
    12. 1onp
      complexed with fom, mw1
      1. region a:126-274 [87167]
      2. region b:126-274 [87170]
  2. Zymomonas mobilis [TaxId: 542] [111051] (2)
    SQ Q9X5F2
    1. 1r0k
      complexed with act
      1. region a:127-264 [104725]
      2. region b:127-264 [104728]
      3. region c:127-264 [104731]
      4. region d:127-264 [104734]
    2. 1r0l
      complexed with ndp
      1. region a:127-264 [104737]
      2. region b:127-264 [104740]
      3. region c:127-264 [104743]
      4. region d:127-264 [104746]
Biliverdin reductase [55373] (1)
1. Biliverdin reductase [55374]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [55375] (3)
    1. 1lc0
      complexed with po4
      1. region a:129-246 [73824]
    2. 1lc3
      complexed with nah, po4
      1. region a:129-246 [73826]
    3. 1gcu
      1. region a:129-246 [39978]
Glucose 6-phosphate dehydrogenase-like [55376] (8)
has many additional secondary structures
1. Glucose-fructose oxidoreductase [55377]
  very similar to the glucose 6-phosphate dehydrogenase domain
  1. Zymomonas mobilis [TaxId: 542] [55378] (12)
    1. 1h6d
      complexed with gol, ndp
      1. region a:213-374 [65657]
      2. region b:213-374 [65659]
      3. region c:213-374 [65661]
      4. region d:213-374 [65663]
      5. region e:213-374 [65665]
      6. region f:213-374 [65667]
      7. region g:213-374 [65669]
      8. region h:213-374 [65671]
      9. region i:213-374 [65673]
      10. region j:213-374 [65675]
      11. region k:213-374 [65677]
      12. region l:213-374 [65679]
    2. 1ryd
      automatically matched to d1evja2
      complexed with act, bme, glc, ndp
      1. region a:161-322 [118802]
    3. 1ryd
      automatically matched to d1evja2
      complexed with act, bme, glc, ndp
      1. region b:161-322 [118804]
    4. 1h6c
      complexed with gol, ndp, sin
      1. region a:213-374 [65653]
      2. region b:213-374 [65655]
    5. 1rye
      automatically matched to d1evja2
      complexed with bme, gol, ndp
      1. region a:161-322 [118806]
    6. 1rye
      automatically matched to d1evja2
      complexed with bme, gol, ndp
      1. region b:161-322 [118808]
    7. 1rye
      automatically matched to d1evja2
      complexed with bme, gol, ndp
      1. region c:161-322 [118810]
    8. 1rye
      automatically matched to d1evja2
      complexed with bme, gol, ndp
      1. region d:161-322 [118812]
    9. 1h6a
      complexed with ndp
      1. region a:213-374 [65645]
      2. region b:213-374 [65647]
    10. 1h6b
      complexed with gol, ndp
      1. region a:213-374 [65649]
      2. region b:213-374 [65651]
    11. 1evj
      complexed with nad; mutant
      1. region a:161-322 [39985]
      2. region b:161-322 [39986]
      3. region c:161-322 [39987]
      4. region d:161-322 [39988]
    12. 1ofg
      complexed with ndp
      1. region a:161-322 [39979]
      2. region b:161-322 [39980]
      3. region c:161-322 [39981]
      4. region d:161-322 [39982]
      5. region e:161-322 [39983]
      6. region f:161-322 [39984]
2. Glucose 6-phosphate dehydrogenase [55379]
  1. Leuconostoc mesenteroides [TaxId: 1245] [55380] (9)
    1. 1h9a
      complexed with nap, so4; mutant
      1. region a:182-412,a:427-485 [60817]
    2. 1dpg
      complexed with po4; mutant
      1. region a:182-412,a:427-485 [39989]
      2. region b:182-412,b:427-485 [39990]
    3. 1h93
      complexed with ca, gol; mutant
      1. region a:182-412,a:427-485 [60808]
    4. 2dpg
      complexed with nap; mutant
      1. region a:182-412,a:427-485 [39991]
    5. 1h9b
      complexed with so4; mutant
      1. region a:182-412,a:427-485 [60819]
    6. 1e7y
      complexed with bg6, ca, ndp; mutant
      1. region a:182-412,a:427-485 [39992]
    7. 1e77
      complexed with bg6, ca; mutant
      1. region a:182-412,a:427-485 [39993]
    8. 1h94
      complexed with nad; mutant
      1. region a:182-412,a:427-485 [60810]
    9. 1e7m
      complexed with ca; mutant
      1. region a:182-412,a:427-485 [39994]
  2. Human (Homo sapiens) [TaxId: 9606] [55381] (1)
    1. 1qki
      complexed with goa, gol, nap
      1. region a:200-434,a:450-511 [39995]
      2. region b:200-434,b:450-511 [39996]
      3. region c:200-434,c:450-511 [39997]
      4. region d:200-434,d:450-511 [39998]
      5. region e:200-434,e:450-511 [39999]
      6. region f:200-434,f:450-511 [40000]
      7. region g:200-434,g:450-511 [40001]
      8. region h:200-434,h:450-511 [40002]
3. Virulence factor MviM [111052]
  1. Escherichia coli [TaxId: 562] [111053] (1)
    SQ P75931
    1. 1tlt
      Structural genomics target
      complexed with so4
      1. region a:128-267 [107136]
      2. region b:128-267 [107138]
4. Putative oxidoreductase VCA1048 [111054]
  1. Vibrio cholerae [TaxId: 666] [111055] (1)
    SQ Q9KKQ4
    1. 1xea
      complexed with ni
      1. region a:123-266 [109573]
      2. region b:123-266 [109575]
      3. region c:123-266 [109577]
      4. region d:123-266 [109579]
5. Probable oxidoreductase At4g09670 [118039]
  1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [118040] (1)
    SQ Q9SZ83
    1. 1ydw
      Structural genomics target
      1. region a:134-304 [116625]
      2. region b:134-304 [116627]
6. Hypothetical protein TM0312 [143544]
  1. Thermotoga maritima [TaxId: 2336] [143545] (2)
    SQ Q9WYE8 132-275
    1. 1zh8
      complexed with edo, na, nap
      1. region a:132-275 [125078]
    2. 1zh8
      automatically matched to 1ZH8 A:132-275
      complexed with edo, na, nap
      1. region b:132-275 [125080]
7. Galactose/lactose metabolism regulatory protein GAL80 [143546]
  1. Yeast (Kluyveromyces lactis) [TaxId: 28985] [143547] (9)
    SQ Q06433 155-373
    1. 2nvw
      1. region a:155-373 [138666]
    2. 3e1k
      automatically matched to d2nvwa2
      1. region a:155-373 [157972]
    3. 3e1k
      automatically matched to d2nvwa2
      1. region c:155-373 [157974]
    4. 3e1k
      automatically matched to d2nvwa2
      1. region e:155-373 [157976]
    5. 3e1k
      automatically matched to d2nvwa2
      1. region g:155-373 [157978]
    6. 3e1k
      automatically matched to d2nvwa2
      1. region i:155-373 [157980]
    7. 3e1k
      automatically matched to d2nvwa2
      1. region k:155-373 [157982]
    8. 3e1k
      automatically matched to d2nvwa2
      1. region m:155-373 [157984]
    9. 3e1k
      automatically matched to d2nvwa2
      1. region o:155-373 [157986]